Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27082
Atp6v1h
ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
1
108664
Mm.27082
B230334L07Rik
RIKEN cDNA B230334L07 gene
1
320384
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GACCAGTGGA
(
6
)
9.8
0.0098
P8 Cb GC
GGAAATGCAG (
7
)
3.3
0.0033
P8 Cb GC
AGACTCAATT (
3
)
1.6
0.0016
P8 Cb GC
GTGCACAACT
(
2
)
1.6
0.0016
Cb medulloblastoma
GACCAGTGGA
(
6
)
20.8
0.0208
P8 GC+1d culture
GACCAGTGGA
(
6
)
4.6
0.0046
P8 GC+1d culture
GGAAATGCAG (
7
)
2.3
0.0023
P8 GC+1d culture
GGAAGTGCAG
(
4
)
1.1
0.0011
P8 GC+1d culture
TCTCAGAAAA (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GGAAATGCAG (
7
)
9.4
0.0094
P8 GC+SHH+1d culture
GACCAGTGGA
(
6
)
3.5
0.0035
3T3 fibroblasts
GACCAGTGGA
(
6
)
10.5
0.0105
E15 cortex
GGAAATGCAG (
7
)
19.8
0.0198
E15 cortex
GACCAGTGGA
(
6
)
9.9
0.0099
P1 cortex
GGAAATGCAG (
7
)
4.5
0.0045
Hypothalamus
GACCAGTGGA
(
6
)
7.2
0.0072
Hypothalamus
TCTCAGAAAA (
3
)
5.4
0.0054
Hypothalamus
AAGACCAGCA (
3
)
1.8
0.0018
Hypothalamus
AGACTCAATT (
3
)
1.8
0.0018
Hypothalamus
GGAAATGCAG (
7
)
1.8
0.0018
E12.5 retina
GACCAGTGGA
(
6
)
9.4
0.0094
E12.5 retina
AGACTCAATT (
3
)
7.5
0.0075
E12.5 retina
GGAAATGCAG (
7
)
7.5
0.0075
E14.5 retina
GACCAGTGGA
(
6
)
3.6
0.0036
E14.5 retina
TCTCAGAAAA (
3
)
3.6
0.0036
E14.5 retina
AGACTCAATT (
3
)
1.8
0.0018
E16.5 retina
GGAAATGCAG (
7
)
7.2
0.0072
E16.5 retina
AGACTCAATT (
3
)
3.6
0.0036
E16.5 retina
TCTCAGAAAA (
3
)
3.6
0.0036
E16.5 retina
AAGACCAGCA (
3
)
1.8
0.0018
E16.5 retina
GGAAGTGCAG
(
4
)
1.8
0.0018
E18.5 retina
GGAAATGCAG (
7
)
5.5
0.0055
E18.5 retina
TCTCAGAAAA (
3
)
3.6
0.0036
E18.5 retina
AGACTCAATT (
3
)
1.8
0.0018
E18.5 retina
GACCAGTGGA
(
6
)
1.8
0.0018
P0.5 retina
GACCAGTGGA
(
6
)
7.9
0.0079
P0.5 retina
GGAAATGCAG (
7
)
3.9
0.0039
P2.5 retina
GGAAATGCAG (
7
)
7
0.007
P2.5 retina
AGACTCAATT (
3
)
3.5
0.0035
P2.5 retina
GACCAGTGGA
(
6
)
1.8
0.0018
P4.5 retina
GGAAATGCAG (
7
)
5.9
0.0059
P4.5 retina
GACCAGTGGA
(
6
)
4
0.004
P6.5 retina
GACCAGTGGA
(
6
)
5
0.005
P6.5 retina
GGAAATGCAG (
7
)
5
0.005
P6.5 retina
GTGCACAACT
(
2
)
3.3
0.0033
P10.5 crx- retina
GACCAGTGGA
(
6
)
9.3
0.0093
P10.5 crx- retina
GGAAATGCAG (
7
)
3.7
0.0037
P10.5 crx+ retina
GACCAGTGGA
(
6
)
13.5
0.0135
P10.5 crx+ retina
GGAAATGCAG (
7
)
11.5
0.0115
P10.5 crx+ retina
AAGACCAGCA (
3
)
1.9
0.0019
P10.5 crx+ retina
TCTCAGAAAA (
3
)
1.9
0.0019
Adult retinal
GGAAATGCAG (
7
)
7.4
0.0074
Adult retinal
GACCAGTGGA
(
6
)
5.6
0.0056
ONL
GGAAATGCAG (
7
)
9.6
0.0096
ONL
GACCAGTGGA
(
6
)
5.7
0.0057
ONL
TCTCAGAAAA (
3
)
3.8
0.0038
