Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27120	Sestd1	SEC14 and spectrin domains 1	2		228071
Human Homolog	SESTD1[SEC14 and spectrin domains 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGATATTAAA 14.7 0.0147 P8 Cb GC GAGTGAAGAT (2) 4.9 0.0049 P8 Cb GC GCTGCCCTTC (5) 3.3 0.0033 P8 Cb GC TTGTTTTTTG 3.3 0.0033 P8 Cb GC GGCTAAAATA (3) 1.6 0.0016 P8 Cb GC GTATTAGAGG 1.6 0.0016 Cb medulloblastoma AGATATTAAA 6.9 0.0069 Cb medulloblastoma GGCTAAAATA (3) 4.6 0.0046 Cb medulloblastoma AAATATTAAA (10) 2.3 0.0023 Cb medulloblastoma GCTGCCCTTC (5) 2.3 0.0023 Cb medulloblastoma GTATTAGAGG 2.3 0.0023 P8 GC+1d culture AGATATTAAA 16 0.016 P8 GC+1d culture AAATATTAAA (10) 2.3 0.0023 P8 GC+1d culture GCTGCCCTTC (5) 2.3 0.0023 P8 GC+1d culture ATACAGGAAT (2) 1.1 0.0011 P8 GC+1d culture GTATTAGAGG 1.1 0.0011 P8 GC+1d culture TTGAAATAGT (2) 1.1 0.0011 P8 GC+SHH+1d culture AGATATTAAA 30.4 0.0304 P8 GC+SHH+1d culture GGCTAAAATA (3) 5.9 0.0059 P8 GC+SHH+1d culture GTATTAGAGG 4.7 0.0047 P8 GC+SHH+1d culture TTGTTTTTTG 3.5 0.0035 P8 GC+SHH+1d culture AAATTCCAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture ATACAGGAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture GAGTGAAGAT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGAAATAGT (2) 1.2 0.0012 3T3 fibroblasts GCTGCCCTTC (5) 3.5 0.0035 3T3 fibroblasts GGCTAAAATA (3) 3.5 0.0035 P1 cortex GCTGCCCTTC (5) 18.2 0.0182 P1 cortex ATACAGGAAT (2) 4.5 0.0045 P1 cortex GGCTAAAATA (3) 4.5 0.0045 P1 cortex TTGAAATAGT (2) 4.5 0.0045 Hypothalamus GCTGCCCTTC (5) 9.1 0.0091 Hypothalamus GGCTAAAATA (3) 7.2 0.0072 Hypothalamus AGATATTAAA 3.6 0.0036 Hypothalamus GAGTGAAGAT (2) 1.8 0.0018 Hypothalamus TATAGAGGAA (6) 1.8 0.0018 Hypothalamus TTGTTTTTTG 1.8 0.0018 E12.5 retina GCTGCCCTTC (5) 9.4 0.0094 E12.5 retina AGATATTAAA 7.5 0.0075 E12.5 retina GGCTAAAATA (3) 3.8 0.0038 E12.5 retina AAATTCCAAG (2) 1.9 0.0019 E12.5 retina GACTGGCTGA (5) 1.9 0.0019 E14.5 retina GCTGCCCTTC (5) 5.5 0.0055 E14.5 retina GGCTAAAATA (3) 5.5 0.0055 E14.5 retina AGATATTAAA 3.6 0.0036 E14.5 retina ATACAGGAAT (2) 1.8 0.0018 E14.5 retina GTATTAGAGG 1.8 0.0018 E16.5 retina GAGTGAAGAT (2) 3.6 0.0036 E16.5 retina GGCTAAAATA (3) 3.6 0.0036 E16.5 retina AGATATTAAA 1.8 0.0018 E16.5 retina GTATTAGAGG 1.8 0.0018 E18.5 retina GGCTAAAATA (3) 7.3 0.0073 E18.5 retina GAGTGAAGAT (2) 3.6 0.0036 E18.5 retina AGATATTAAA 1.8 0.0018 P0.5 retina GCTGCCCTTC (5) 15.7 0.0157 P0.5 retina GAGTGAAGAT (2) 5.9 0.0059 P0.5 retina GGCTAAAATA (3) 3.9 0.0039 P0.5 retina AGATATTAAA 2 0.002 P0.5 retina GTATTAGAGG 2 0.002 P2.5 retina GCTGCCCTTC (5) 10.6 0.0106 P2.5 retina GGCTAAAATA (3) 7 0.007 P2.5 retina AGATATTAAA 5.3 0.0053 P2.5 retina AAATATTAAA (10) 1.8 0.0018 P2.5 retina AAATTCCAAG (2) 1.8 0.0018 P2.5 retina GAGTGAAGAT (2) 1.8 0.0018 P2.5 retina TTGTTTTTTG 1.8 0.0018 P4.5 retina GGCTAAAATA (3) 7.9 0.0079 P4.5 retina AGATATTAAA 4 0.004 P4.5 retina GCTGCCCTTC (5) 4 0.004 P6.5 retina GCTGCCCTTC (5) 10 0.01 P6.5 retina GGCTAAAATA (3) 8.3 0.0083 P6.5 retina GAGTGAAGAT (2) 5 0.005 P6.5 retina GACTGGCTGA (5) 3.3 0.0033 P6.5 retina AGATATTAAA 1.7 0.0017 P6.5 retina GTATTAGAGG 1.7 0.0017 P6.5 retina TTGAAATAGT (2) 1.7 0.0017 P6.5 retina TTGTTTTTTG 1.7 0.0017 P10.5 crx- retina TTGTTTTTTG 3.7 0.0037 P10.5 crx- retina AGATATTAAA 1.9 0.0019 P10.5 crx- retina GGCTAAAATA (3) 1.9 0.0019 P10.5 crx- retina TTGAAATAGT (2) 1.9 0.0019 P10.5 crx+ retina TATAGAGGAA (6) 3.8 0.0038 P10.5 crx+ retina TTGTTTTTTG 3.8 0.0038 P10.5 crx+ retina AGATATTAAA 1.9 0.0019 P10.5 crx+ retina GCTGCCCTTC (5) 1.9 0.0019 P10.5 crx+ retina GGCTAAAATA (3) 1.9 0.0019 P10.5 crx+ retina TTGAAATAGT (2) 1.9 0.0019 Adult retinal GCTGCCCTTC (5) 18.5 0.0185 Adult retinal AAATTCCAAG (2) 1.9 0.0019 Adult retinal GAGTGAAGAT (2) 1.9 0.0019 Adult retinal GGCTAAAATA (3) 1.9 0.0019 ONL GCTGCCCTTC (5) 5.7 0.0057 ONL GAGTGAAGAT (2) 3.8 0.0038 ONL AGATATTAAA 1.9 0.0019