Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27123	Atad1	ATPase family, AAA domain containing 1	19		67979
Gene Ontology	ATP binding | nucleotide binding
Human Homolog	ATAD1[ATPase family, AAA domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TTCAGAAATG (6) 8.2 0.0082 P8 Cb GC TCAAGGTGCC (2) 3.3 0.0033 P8 Cb GC TGACAGAACT (2) 3.3 0.0033 P8 Cb GC AACATCAAAT (2) 1.6 0.0016 P8 Cb GC CCATTACATT 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma TTCAGAAATG (6) 16.2 0.0162 Cb medulloblastoma TGACAGAACT (2) 4.6 0.0046 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture TTCAGAAATG (6) 5.7 0.0057 P8 GC+1d culture TGACAGAACT (2) 4.6 0.0046 P8 GC+1d culture CCATTACATT 2.3 0.0023 P8 GC+1d culture CGGAGGAAAC 2.3 0.0023 P8 GC+1d culture TCAAGGTGCC (2) 2.3 0.0023 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture TTCAGAAATG (6) 4.7 0.0047 P8 GC+SHH+1d culture CGGAGGAAAC 2.3 0.0023 P8 GC+SHH+1d culture TGACAGAACT (2) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts TTCAGAAATG (6) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex TTCAGAAATG (6) 9.9 0.0099 E15 cortex TGACAGAACT (2) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex CCATTACATT 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus CCATTACATT 3.6 0.0036 Hypothalamus TGACAGAACT (2) 3.6 0.0036 Hypothalamus CGGAGGAAAC 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina CCATTACATT 1.9 0.0019 E12.5 retina TGACAGAACT (2) 1.9 0.0019 E12.5 retina TTCAGAAATG (6) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TTCAGAAATG (6) 7.3 0.0073 E14.5 retina CCATTACATT 3.6 0.0036 E14.5 retina TGACAGAACT (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina CCATTACATT 3.6 0.0036 E16.5 retina TTCAGAAATG (6) 3.6 0.0036 E16.5 retina AACATCAAAT (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina TTCAGAAATG (6) 9.1 0.0091 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TGACAGAACT (2) 5.9 0.0059 P0.5 retina TTCAGAAATG (6) 3.9 0.0039 P0.5 retina AACATCAAAT (2) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina CCATTACATT 3.5 0.0035 P2.5 retina AACATCAAAT (2) 1.8 0.0018 P2.5 retina TTCAGAAATG (6) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TTCAGAAATG (6) 4 0.004 P4.5 retina CGGAGGAAAC 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina TTCAGAAATG (6) 5 0.005 P6.5 retina CGGAGGAAAC 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TTCAGAAATG (6) 7.4 0.0074 P10.5 crx- retina TCAAGGTGCC (2) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TTCAGAAATG (6) 7.7 0.0077 P10.5 crx+ retina TGACAGAACT (2) 5.8 0.0058 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TTCAGAAATG (6) 5.6 0.0056 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL TTCAGAAATG (6) 5.7 0.0057 ONL TGACAGAACT (2) 1.9 0.0019