Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27135
Abcf3
ATP-binding cassette, sub-family F (GCN20), member 3
16
16 22.0 cM
27406
Mm.27135
BB119416
expressed sequence BB119416
16
106455
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTGCTGTGT
(
6
)
4.9
0.0049
P8 Cb GC
TACAACACTC
(
3
)
4.9
0.0049
P8 Cb GC
TAAAACACTC (
5
)
1.6
0.0016
Cb medulloblastoma
GCTGCTGTGT
(
6
)
9.2
0.0092
Cb medulloblastoma
GTGGTCAGGG (
8
)
2.3
0.0023
P8 GC+1d culture
TACAACACTC
(
3
)
10.3
0.0103
P8 GC+1d culture
GCTGCTGTGT
(
6
)
8
0.008
P8 GC+1d culture
TTGGGCCCTG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TACAACACTC
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
GCTGCTGTGT
(
6
)
3.5
0.0035
E15 cortex
GCTGCTGTGT
(
6
)
4.9
0.0049
E15 cortex
TACAACACTC
(
3
)
4.9
0.0049
P1 cortex
TACAACACTC
(
3
)
40.9
0.0409
P1 cortex
TTGGGCCCTG
(
2
)
4.5
0.0045
Hypothalamus
GCTGCTGTGT
(
6
)
1.8
0.0018
Hypothalamus
GTGGTCAGGG (
8
)
1.8
0.0018
Hypothalamus
TACAACACTC
(
3
)
1.8
0.0018
E12.5 retina
GCTGCTGTGT
(
6
)
11.3
0.0113
E12.5 retina
TACAACACTC
(
3
)
5.6
0.0056
E12.5 retina
TAAAACACTC (
5
)
1.9
0.0019
E14.5 retina
GCTGCTGTGT
(
6
)
3.6
0.0036
E14.5 retina
TACAACACTC
(
3
)
3.6
0.0036
E16.5 retina
GCTGCTGTGT
(
6
)
7.2
0.0072
E16.5 retina
TACAACACTC
(
3
)
5.4
0.0054
E18.5 retina
GCTGCTGTGT
(
6
)
7.3
0.0073
E18.5 retina
GTGGTCAGGG (
8
)
1.8
0.0018
E18.5 retina
TACAACACTC
(
3
)
1.8
0.0018
P0.5 retina
TACAACACTC
(
3
)
9.8
0.0098
P0.5 retina
GCTGCTGTGT
(
6
)
3.9
0.0039
P2.5 retina
GCTGCTGTGT
(
6
)
10.6
0.0106
P2.5 retina
TACAACACTC
(
3
)
3.5
0.0035
P4.5 retina
TACAACACTC
(
3
)
13.9
0.0139
P4.5 retina
GCTGCTGTGT
(
6
)
7.9
0.0079
P4.5 retina
GTGGTCAGGG (
8
)
2
0.002
P6.5 retina
TACAACACTC
(
3
)
6.7
0.0067
P6.5 retina
GCTGCTGTGT
(
6
)
1.7
0.0017
P6.5 retina
TAAAACACTC (
5
)
1.7
0.0017
P10.5 crx- retina
GCTGCTGTGT
(
6
)
5.6
0.0056
P10.5 crx- retina
TACAACACTC
(
3
)
3.7
0.0037
P10.5 crx+ retina
GCTGCTGTGT
(
6
)
9.6
0.0096
P10.5 crx+ retina
TACAACACTC
(
3
)
3.8
0.0038
Adult retinal
GCTGCTGTGT
(
6
)
7.4
0.0074
Adult retinal
TACAACACTC
(
3
)
7.4
0.0074
ONL
GTGGTCAGGG (
8
)
1.9
0.0019
