Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.271567
F830003O12Rik
RIKEN cDNA F830003O12 gene
15
403350
Mm.271567
6030446N20Rik
RIKEN cDNA 6030446N20 gene
18
338363
Human Homolog
MGC11386[hypothetical protein MGC11386]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCTCTGCAT (
29
)
8.2
0.0082
P8 Cb GC
CTTATTTTTA (
6
)
1.6
0.0016
Cb medulloblastoma
GCCTCTGCAT (
29
)
6.9
0.0069
Cb medulloblastoma
CTTATTTTTA (
6
)
2.3
0.0023
P8 GC+1d culture
GCCTCTGCAT (
29
)
20.5
0.0205
P8 GC+1d culture
CCCTCCCACA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GCCTCTGCAT (
29
)
9.4
0.0094
P8 GC+SHH+1d culture
GCAGCTGCTG (
6
)
1.2
0.0012
3T3 fibroblasts
GCCTCTGCAT (
29
)
7
0.007
3T3 fibroblasts
AGAGGAAGCA (
5
)
3.5
0.0035
E15 cortex
GCCTCTGCAT (
29
)
39.6
0.0396
P1 cortex
GCCTCTGCAT (
29
)
18.2
0.0182
Hypothalamus
GCCTCTGCAT (
29
)
10.9
0.0109
Hypothalamus
CTTATTTTTA (
6
)
7.2
0.0072
Hypothalamus
CTCTGCAAAA
(
2
)
1.8
0.0018
Hypothalamus
TGGTATACAA (
3
)
1.8
0.0018
E12.5 retina
GCCTCTGCAT (
29
)
11.3
0.0113
E12.5 retina
TGGTATACAA (
3
)
1.9
0.0019
E14.5 retina
GCCTCTGCAT (
29
)
14.6
0.0146
E16.5 retina
GCCTCTGCAT (
29
)
16.3
0.0163
E16.5 retina
CTCTGCAAAA
(
2
)
1.8
0.0018
E18.5 retina
GCCTCTGCAT (
29
)
9.1
0.0091
E18.5 retina
CTCTGCAAAA
(
2
)
1.8
0.0018
P0.5 retina
GCCTCTGCAT (
29
)
23.6
0.0236
P2.5 retina
GCCTCTGCAT (
29
)
31.7
0.0317
P2.5 retina
CTTATTTTTA (
6
)
1.8
0.0018
P4.5 retina
GCCTCTGCAT (
29
)
19.8
0.0198
P4.5 retina
AGAGGAAGCA (
5
)
2
0.002
P4.5 retina
TGGTATACAA (
3
)
2
0.002
P6.5 retina
GCCTCTGCAT (
29
)
21.7
0.0217
P6.5 retina
CCCTCCCACA (
5
)
1.7
0.0017
P10.5 crx- retina
GCCTCTGCAT (
29
)
27.9
0.0279
P10.5 crx- retina
CTCTGCAAAA
(
2
)
1.9
0.0019
P10.5 crx- retina
GCAGCTGCTG (
6
)
1.9
0.0019
P10.5 crx+ retina
GCCTCTGCAT (
29
)
32.7
0.0327
P10.5 crx+ retina
CTTATTTTTA (
6
)
1.9
0.0019
P10.5 crx+ retina
GCAGCTGCTG (
6
)
1.9
0.0019
Adult retinal
GCCTCTGCAT (
29
)
33.3
0.0333
Adult retinal
GCAGCTGCTG (
6
)
1.9
0.0019
Adult retinal
TGGTATACAA (
3
)
1.9
0.0019
ONL
GCCTCTGCAT (
29
)
17.2
0.0172
