Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271578	Ldhd	lactate dehydrogenase D	8	8 55.0 cM	52815
Mm.271578	Znrf1	zinc and ring finger 1	8	8 E1	170737
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	ZNRF1[zinc and ring finger 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 3 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGAGAAAAT (4) 4.9 0.0049 P8 Cb GC CAGGATAGGT (2) 3.3 0.0033 P8 Cb GC GAGTGATTGT (4) 1.6 0.0016 P8 Cb GC TCCTGACCCT (4) 1.6 0.0016 Cb medulloblastoma CAGGATAGGT (2) 2.3 0.0023 Cb medulloblastoma GTGAGAAAAT (4) 2.3 0.0023 P8 GC+1d culture GTGAGAAAAT (4) 5.7 0.0057 P8 GC+1d culture ATGTTTGGCT (4) 3.4 0.0034 P8 GC+1d culture CAGGATAGGT (2) 3.4 0.0034 P8 GC+1d culture GAGTGATTGT (4) 3.4 0.0034 P8 GC+1d culture AGTCTATGCA (3) 1.1 0.0011 P8 GC+1d culture CAGAGAGAGG (6) 1.1 0.0011 P8 GC+1d culture CTGTCTTGCC (3) 1.1 0.0011 P8 GC+1d culture GCCTGAGGTC (2) 1.1 0.0011 P8 GC+1d culture GGCATTGGAC (4) 1.1 0.0011 P8 GC+1d culture TCCTCTGAAT (5) 1.1 0.0011 P8 GC+1d culture TGTGAATGGC (3) 1.1 0.0011 P8 GC+SHH+1d culture GTGAGAAAAT (4) 4.7 0.0047 P8 GC+SHH+1d culture CAGGATAGGT (2) 3.5 0.0035 P8 GC+SHH+1d culture GAGTGATTGT (4) 3.5 0.0035 P8 GC+SHH+1d culture CAGAGAGAGG (6) 2.3 0.0023 P8 GC+SHH+1d culture ATGTTTGGCT (4) 1.2 0.0012 P8 GC+SHH+1d culture GGCATTGGAC (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGAATGGC (3) 1.2 0.0012 3T3 fibroblasts CTGTCTTGCC (3) 10.5 0.0105 E15 cortex CAGGATAGGT (2) 4.9 0.0049 E15 cortex TCCTCTGAAT (5) 4.9 0.0049 P1 cortex CAGGATAGGT (2) 22.7 0.0227 P1 cortex GTGAGAAAAT (4) 9.1 0.0091 P1 cortex ATGTTTGGCT (4) 4.5 0.0045 P1 cortex TCCTGACCCT (4) 4.5 0.0045 Hypothalamus GTGAGAAAAT (4) 10.9 0.0109 Hypothalamus CAGGATAGGT (2) 3.6 0.0036 Hypothalamus AGTCTATGCA (3) 1.8 0.0018 Hypothalamus CAGAGAGAGG (6) 1.8 0.0018 Hypothalamus CTGTCTTGCC (3) 1.8 0.0018 Hypothalamus GAGTGATTGT (4) 1.8 0.0018 Hypothalamus TCCTCTGAAT (5) 1.8 0.0018 Hypothalamus TCCTGACCCT (4) 1.8 0.0018 E12.5 retina GAGTGATTGT (4) 5.6 0.0056 E12.5 retina GTGAGAAAAT (4) 3.8 0.0038 E12.5 retina CAGGATAGGT (2) 1.9 0.0019 E12.5 retina GGCATTGGAC (4) 1.9 0.0019 E12.5 retina TCCTGACCCT (4) 1.9 0.0019 E14.5 retina AGTCTATGCA (3) 1.8 0.0018 E14.5 retina CAGGATAGGT (2) 1.8 0.0018 E14.5 retina GAGTGATTGT (4) 1.8 0.0018 E14.5 retina GGCATTGGAC (4) 1.8 0.0018 E14.5 retina GTGAGAAAAT (4) 1.8 0.0018 E16.5 retina GAGTGATTGT (4) 3.6 0.0036 E16.5 retina AGTCTATGCA (3) 1.8 0.0018 E16.5 retina CAGGATAGGT (2) 1.8 0.0018 E16.5 retina GGCATTGGAC (4) 1.8 0.0018 E18.5 retina GAGTGATTGT (4) 10.9 0.0109 E18.5 retina CAGGATAGGT (2) 5.5 0.0055 E18.5 retina GTGAGAAAAT (4) 3.6 0.0036 E18.5 retina GGCATTGGAC (4) 1.8 0.0018 E18.5 retina TGTGAATGGC (3) 1.8 0.0018 P0.5 retina GAGTGATTGT (4) 5.9 0.0059 P0.5 retina AGTCTATGCA (3) 2 0.002 P0.5 retina CAGGATAGGT (2) 2 0.002 P0.5 retina GTGAGAAAAT (4) 2 0.002 P0.5 retina TCCTGACCCT (4) 2 0.002 P2.5 retina CAGGATAGGT (2) 10.6 0.0106 P2.5 retina GAGTGATTGT (4) 10.6 0.0106 P2.5 retina GTGAGAAAAT (4) 3.5 0.0035 P2.5 retina CAGAGAGAGG (6) 1.8 0.0018 P2.5 retina TCCTCTGAAT (5) 1.8 0.0018 P2.5 retina TCCTGACCCT (4) 1.8 0.0018 P4.5 retina GAGTGATTGT (4) 13.9 0.0139 P4.5 retina CAGGATAGGT (2) 7.9 0.0079 P4.5 retina GTGAGAAAAT (4) 4 0.004 P4.5 retina AGTCTATGCA (3) 2 0.002 P4.5 retina TCCTCTGAAT (5) 2 0.002 P6.5 retina GAGTGATTGT (4) 8.3 0.0083 P6.5 retina GTGAGAAAAT (4) 5 0.005 P6.5 retina CAGGATAGGT (2) 3.3 0.0033 P6.5 retina GGCATTGGAC (4) 3.3 0.0033 P6.5 retina AGTCTATGCA (3) 1.7 0.0017 P6.5 retina ATGTTTGGCT (4) 1.7 0.0017 P6.5 retina TCCTGACCCT (4) 1.7 0.0017 P10.5 crx- retina GAGTGATTGT (4) 9.3 0.0093 P10.5 crx- retina GTGAGAAAAT (4) 5.6 0.0056 P10.5 crx- retina CAGGATAGGT (2) 3.7 0.0037 P10.5 crx- retina AGTCTATGCA (3) 1.9 0.0019 P10.5 crx- retina CTGTCTTGCC (3) 1.9 0.0019 P10.5 crx- retina GGCATTGGAC (4) 1.9 0.0019 P10.5 crx+ retina AGTCTATGCA (3) 3.8 0.0038 P10.5 crx+ retina CAGGATAGGT (2) 3.8 0.0038 P10.5 crx+ retina GCCTGAGGTC (2) 3.8 0.0038 P10.5 crx+ retina CAGAGAGAGG (6) 1.9 0.0019 P10.5 crx+ retina GAGTGATTGT (4) 1.9 0.0019 Adult retinal AGTCTATGCA (3) 9.3 0.0093 Adult retinal ATGTTTGGCT (4) 3.7 0.0037 Adult retinal GAGTGATTGT (4) 3.7 0.0037 Adult retinal CAGGATAGGT (2) 1.9 0.0019 Adult retinal CTGTCTTGCC (3) 1.9 0.0019 Adult retinal GGCATTGGAC (4) 1.9 0.0019 Adult retinal GTGAGAAAAT (4) 1.9 0.0019 Adult retinal TGTGAATGGC (3) 1.9 0.0019 ONL AGTCTATGCA (3) 9.6 0.0096 ONL GAGTGATTGT (4) 5.7 0.0057 ONL ATGTTTGGCT (4) 3.8 0.0038