Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.271657
2010005J08Rik
RIKEN cDNA 2010005J08 gene
11
72046
Mm.271657
9130001I21Rik
RIKEN cDNA 9130001I21 gene
11
71608
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
AGCGCAGTGG (
7
)
2.3
0.0023
Cb medulloblastoma
TACGGTGTAT
(
3
)
2.3
0.0023
P8 GC+1d culture
GCTGTGTGTT (
3
)
4.6
0.0046
P8 GC+1d culture
CCCAACTATC
(
4
)
2.3
0.0023
P8 GC+1d culture
TACGGTGTAT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TACGGTGTAT
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
GCTGTGTGTT (
3
)
1.2
0.0012
3T3 fibroblasts
TACGGTGTAT
(
3
)
3.5
0.0035
Hypothalamus
AGCGCAGTGG (
7
)
3.6
0.0036
Hypothalamus
GTGCTGGACG
(
3
)
3.6
0.0036
Hypothalamus
GATGTCAGCA (
6
)
1.8
0.0018
Hypothalamus
GCTGTGTGTT (
3
)
1.8
0.0018
E12.5 retina
GATGTCAGCA (
6
)
3.8
0.0038
E12.5 retina
GCTGTGTGTT (
3
)
1.9
0.0019
E12.5 retina
TACGGTGTAT
(
3
)
1.9
0.0019
E14.5 retina
GTGCTGGACG
(
3
)
5.5
0.0055
E14.5 retina
CCCAACTATC
(
4
)
1.8
0.0018
E16.5 retina
GTGCTGGACG
(
3
)
3.6
0.0036
E16.5 retina
AGCGCAGTGG (
7
)
1.8
0.0018
E16.5 retina
GCTGTGTGTT (
3
)
1.8
0.0018
E18.5 retina
GTGCTGGACG
(
3
)
1.8
0.0018
P0.5 retina
GATGTCAGCA (
6
)
3.9
0.0039
P0.5 retina
AGCGCAGTGG (
7
)
2
0.002
P2.5 retina
GCTGTGTGTT (
3
)
3.5
0.0035
P2.5 retina
GTGCTGGACG
(
3
)
1.8
0.0018
P4.5 retina
TACGGTGTAT
(
3
)
2
0.002
P6.5 retina
GATGTCAGCA (
6
)
1.7
0.0017
P6.5 retina
TACGGTGTAT
(
3
)
1.7
0.0017
Adult retinal
GATGTCAGCA (
6
)
1.9
0.0019
Adult retinal
TACGGTGTAT
(
3
)
1.9
0.0019
ONL
AGCGCAGTGG (
7
)
1.9
0.0019
ONL
GATGTCAGCA (
6
)
1.9
0.0019
ONL
TACGGTGTAT
(
3
)
1.9
0.0019
