Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271689	Tcirg1	T-cell, immune regulator 1	19	19 6.0 cM	27060
Gene Ontology	hydrogen transport | hydrogen-exporting ATPase activity, phosphorylative mechanism | integral to membrane | membrane | plasma membrane
Human Homolog	TCIRG1[T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein a isoform 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GGCAGGAAGT (3) 1.6 0.0016 P8 Cb GC GGGCCAGGCT (4) 1.6 0.0016 P8 Cb GC TCTTCCCATA (4) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GGCCCGAGAG 4.6 0.0046 Cb medulloblastoma CCCTGCGGTT (2) 2.3 0.0023 Cb medulloblastoma GGCAGGAAGT (3) 2.3 0.0023 Cb medulloblastoma TCTTCCCATA (4) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GGCAGGAAGT (3) 5.7 0.0057 P8 GC+1d culture TCTTCCCATA (4) 3.4 0.0034 P8 GC+1d culture GGCCCGAGAG 2.3 0.0023 P8 GC+1d culture GGGCCAGGCT (4) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GGCAGGAAGT (3) 4.7 0.0047 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GGCAGGAAGT (3) 17.5 0.0175 3T3 fibroblasts CCCTGCGGTT (2) 10.5 0.0105 3T3 fibroblasts CCCTGGGTTG (5) 3.5 0.0035 3T3 fibroblasts GGCCCGAGAG 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex TGCTGTGGAG (6) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GGCCCGAGAG 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GGCAGGAAGT (3) 3.6 0.0036 Hypothalamus TGCTGTGGAG (6) 3.6 0.0036 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TCTTCCCATA (4) 5.6 0.0056 E12.5 retina GGCAGGAAGT (3) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GGCCCGAGAG 1.8 0.0018 E14.5 retina TCTTCCCATA (4) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TCTTCCCATA (4) 5.4 0.0054 E16.5 retina CCCTGCGGTT (2) 1.8 0.0018 E16.5 retina GGCAGGAAGT (3) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GGCCCGAGAG 3.6 0.0036 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TCTTCCCATA (4) 5.9 0.0059 P0.5 retina GGCCCGAGAG 3.9 0.0039 P0.5 retina CCCTGCGGTT (2) 2 0.002 P0.5 retina CCCTGGGTTG (5) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GGCCCGAGAG 1.8 0.0018 P2.5 retina TCTTCCCATA (4) 1.8 0.0018 P2.5 retina TGCTGTGGAG (6) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GGCCCGAGAG 4 0.004 P4.5 retina TCTTCCCATA (4) 4 0.004 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GGCCCGAGAG 3.3 0.0033 P6.5 retina TCTTCCCATA (4) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GGCCCGAGAG 1.9 0.0019 P10.5 crx- retina GGGCCAGGCT (4) 1.9 0.0019 P10.5 crx- retina TCTTCCCATA (4) 1.9 0.0019 P10.5 crx- retina TGCTGTGGAG (6) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GGCCCGAGAG 5.8 0.0058 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CCCTGGGTTG (5) 3.7 0.0037 Adult retinal GGCAGGAAGT (3) 3.7 0.0037 Adult retinal TCTTCCCATA (4) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TGCTGTGGAG (6) 1.9 0.0019