Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271715	Phf5a	PHD finger protein 5A	15		68479
Gene Ontology	DNA binding | mRNA processing | nuclear matrix | nuclear mRNA splicing, via spliceosome | nucleolus | nucleus | regulation of transcription, DNA-dependent | spliceosome complex
Human Homolog	PHF5A[PHD finger protein 5A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGCATCTGG (3) 1.6 0.0016 Cb medulloblastoma GGCACTTGCT 2.3 0.0023 Cb medulloblastoma GGTGGGTGGC (5) 2.3 0.0023 P8 GC+1d culture GAGCATCTGG (3) 5.7 0.0057 P8 GC+SHH+1d culture GAGCATCTGG (3) 3.5 0.0035 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GGCACTTGCT 3.5 0.0035 E15 cortex GAGCATCTGG (3) 14.8 0.0148 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GAGCATCTGG (3) 4.5 0.0045 Hypothalamus GAGCATCTGG (3) 1.8 0.0018 E14.5 retina GAGCATCTGG (3) 3.6 0.0036 E14.5 retina GGCACTTGCT 1.8 0.0018 E16.5 retina GAGCATCTGG (3) 3.6 0.0036 P0.5 retina GAGCATCTGG (3) 7.9 0.0079 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina GAGCATCTGG (3) 5.3 0.0053 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GAGCATCTGG (3) 4 0.004 P4.5 retina GGCACTTGCT 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GAGCATCTGG (3) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GGTGGGTGGC (5) 1.7 0.0017 P10.5 crx- retina GAGCATCTGG (3) 1.9 0.0019 P10.5 crx- retina GGCACTTGCT 1.9 0.0019 P10.5 crx+ retina GAGCATCTGG (3) 1.9 0.0019 Adult retinal GAGCATCTGG (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GAGCATCTGG (3) 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GGTGGGTGGC (5) 1.9 0.0019