Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27182
BC017643
cDNA sequence BC017643
11
217370
Human Homolog
MGC4368[hypothetical protein MGC4368]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAACTTGCAA
(
2
)
1.6
0.0016
P8 Cb GC
GGCACCTGCT (
4
)
1.6
0.0016
P8 Cb GC
TAGAGCTTTA
(
3
)
1.6
0.0016
Cb medulloblastoma
CAACTTGCAA
(
2
)
4.6
0.0046
Cb medulloblastoma
TAGAGCTTTA
(
3
)
4.6
0.0046
Cb medulloblastoma
CAACTTGAAA
2.3
0.0023
P8 GC+1d culture
CAACTTGCAA
(
2
)
5.7
0.0057
P8 GC+1d culture
GGCACCTGCT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CAACTTGCAA
(
2
)
5.9
0.0059
3T3 fibroblasts
CAACTTGCAA
(
2
)
3.5
0.0035
P1 cortex
GGCACCTGCT (
4
)
9.1
0.0091
P1 cortex
TAGAGCTTTA
(
3
)
9.1
0.0091
Hypothalamus
TAGAGCTTTA
(
3
)
9.1
0.0091
Hypothalamus
CAACTTGCAA
(
2
)
5.4
0.0054
Hypothalamus
GGCACCTGCT (
4
)
1.8
0.0018
E12.5 retina
CAACTTGCAA
(
2
)
3.8
0.0038
E12.5 retina
TAGAGCTTTA
(
3
)
3.8
0.0038
E12.5 retina
CAACTTGAAA
1.9
0.0019
E14.5 retina
TAGAGCTTTA
(
3
)
7.3
0.0073
E14.5 retina
CAACTTGCAA
(
2
)
5.5
0.0055
E16.5 retina
TAGAGCTTTA
(
3
)
10.9
0.0109
E16.5 retina
CAACTTGCAA
(
2
)
5.4
0.0054
E16.5 retina
CAACTTGAAA
1.8
0.0018
E16.5 retina
GGCACCTGCT (
4
)
1.8
0.0018
E18.5 retina
CAACTTGCAA
(
2
)
10.9
0.0109
E18.5 retina
TAGAGCTTTA
(
3
)
1.8
0.0018
P0.5 retina
TAGAGCTTTA
(
3
)
9.8
0.0098
P0.5 retina
CAACTTGCAA
(
2
)
2
0.002
P0.5 retina
GGCACCTGCT (
4
)
2
0.002
P2.5 retina
TAGAGCTTTA
(
3
)
8.8
0.0088
P2.5 retina
CAACTTGCAA
(
2
)
7
0.007
P2.5 retina
CAACTTGAAA
1.8
0.0018
P4.5 retina
TAGAGCTTTA
(
3
)
13.9
0.0139
P4.5 retina
CAACTTGCAA
(
2
)
2
0.002
P6.5 retina
TAGAGCTTTA
(
3
)
15
0.015
P6.5 retina
CAACTTGCAA
(
2
)
6.7
0.0067
P10.5 crx- retina
TAGAGCTTTA
(
3
)
7.4
0.0074
P10.5 crx- retina
CAACTTGCAA
(
2
)
3.7
0.0037
P10.5 crx+ retina
CAACTTGCAA
(
2
)
5.8
0.0058
P10.5 crx+ retina
GGCACCTGCT (
4
)
3.8
0.0038
P10.5 crx+ retina
TAGAGCTTTA
(
3
)
3.8
0.0038
Adult retinal
TAGAGCTTTA
(
3
)
11.1
0.0111
ONL
TAGAGCTTTA
(
3
)
11.5
0.0115
ONL
CAACTTGCAA
(
2
)
1.9
0.0019
