Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271854	Lrp1	low density lipoprotein receptor-related protein 1	10		16971
Gene Ontology	calcium ion binding | cell proliferation | coated pit | endocytosis | extracellular space | integral to membrane | integral to plasma membrane | lipid metabolism | lipid transporter activity | lipoprotein binding | membrane | membrane fraction | pathogenesis | receptor activity
Human Homolog	LRP1[low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTTCCCTT (9) 4.9 0.0049 P8 Cb GC GGAGGTGGAG (6) 4.9 0.0049 Cb medulloblastoma GGGGGCCACG (3) 2.3 0.0023 P8 GC+1d culture GGAGGTGGAG (6) 33.1 0.0331 P8 GC+1d culture CCCTTCCCTT (9) 14.8 0.0148 P8 GC+1d culture CTCAGTATCC (2) 5.7 0.0057 P8 GC+1d culture GCCATCTGAG (8) 1.1 0.0011 P8 GC+SHH+1d culture CCCTTCCCTT (9) 17.6 0.0176 P8 GC+SHH+1d culture GGAGGTGGAG (6) 14.1 0.0141 P8 GC+SHH+1d culture CTCAGTATCC (2) 2.3 0.0023 3T3 fibroblasts CTCAGTATCC (2) 24.5 0.0245 3T3 fibroblasts GGAGGTGGAG (6) 7 0.007 3T3 fibroblasts CCCTTCCCTT (9) 3.5 0.0035 E15 cortex CCCTTCCCTT (9) 24.7 0.0247 E15 cortex GGAGGTGGAG (6) 14.8 0.0148 P1 cortex CCCTTCCCTT (9) 18.2 0.0182 P1 cortex CTCAGTATCC (2) 4.5 0.0045 Hypothalamus CCCTTCCCTT (9) 5.4 0.0054 Hypothalamus GGAGGTGGAG (6) 5.4 0.0054 Hypothalamus CTCAGTATCC (2) 3.6 0.0036 Hypothalamus GGGGGCCACG (3) 1.8 0.0018 E12.5 retina CCCTTCCCTT (9) 16.9 0.0169 E14.5 retina CCCTTCCCTT (9) 10.9 0.0109 E14.5 retina GGAGGTGGAG (6) 1.8 0.0018 E16.5 retina CCCTTCCCTT (9) 41.7 0.0417 E16.5 retina GGAGGTGGAG (6) 5.4 0.0054 E16.5 retina GCCATCTGAG (8) 1.8 0.0018 E18.5 retina CCCTTCCCTT (9) 9.1 0.0091 E18.5 retina GCCATCTGAG (8) 3.6 0.0036 E18.5 retina GGAGGTGGAG (6) 3.6 0.0036 P0.5 retina CCCTTCCCTT (9) 37.3 0.0373 P0.5 retina GGAGGTGGAG (6) 5.9 0.0059 P2.5 retina CCCTTCCCTT (9) 17.6 0.0176 P2.5 retina GGAGGTGGAG (6) 3.5 0.0035 P2.5 retina CTCAGTATCC (2) 1.8 0.0018 P2.5 retina GGGGGCCACG (3) 1.8 0.0018 P4.5 retina CCCTTCCCTT (9) 5.9 0.0059 P4.5 retina GGAGGTGGAG (6) 5.9 0.0059 P4.5 retina CTCAGTATCC (2) 2 0.002 P4.5 retina GCCATCTGAG (8) 2 0.002 P6.5 retina CCCTTCCCTT (9) 15 0.015 P6.5 retina GGAGGTGGAG (6) 3.3 0.0033 P6.5 retina CTCAGTATCC (2) 1.7 0.0017 P6.5 retina GCCATCTGAG (8) 1.7 0.0017 P10.5 crx- retina GGAGGTGGAG (6) 7.4 0.0074 P10.5 crx- retina CCCTTCCCTT (9) 3.7 0.0037 P10.5 crx- retina CTCAGTATCC (2) 1.9 0.0019 P10.5 crx+ retina GGAGGTGGAG (6) 5.8 0.0058 P10.5 crx+ retina CCCTTCCCTT (9) 3.8 0.0038 P10.5 crx+ retina CTCAGTATCC (2) 1.9 0.0019 Adult retinal CCCTTCCCTT (9) 5.6 0.0056 Adult retinal GCCATCTGAG (8) 1.9 0.0019 Adult retinal GGAGGTGGAG (6) 1.9 0.0019 ONL GGAGGTGGAG (6) 3.8 0.0038 ONL CTCAGTATCC (2) 1.9 0.0019 ONL GCCATCTGAG (8) 1.9 0.0019