Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271877	Txnip	thioredoxin interacting protein	3	3 47.1 cM	56338
Gene Ontology	cytoplasm | enzyme inhibitor activity | protein binding | response to oxidative stress
Human Homolog	TXNIP[thioredoxin interacting protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGAAAAGAA (6) 3.3 0.0033 P8 Cb GC TAGACCCAGG (3) 1.6 0.0016 P8 Cb GC TATCAGCTCC (5) 1.6 0.0016 P8 Cb GC TGGTGTGTGT (8) 1.6 0.0016 Cb medulloblastoma CCCCCCACCC (9) 4.6 0.0046 Cb medulloblastoma TATCAGCTCC (5) 4.6 0.0046 P8 GC+1d culture TATCAGCTCC (5) 3.4 0.0034 P8 GC+1d culture GCCAAAATTT (6) 2.3 0.0023 P8 GC+1d culture GCACAGATGA (4) 1.1 0.0011 P8 GC+1d culture TGGTGTGTGT (8) 1.1 0.0011 P8 GC+SHH+1d culture TATCAGCTCC (5) 4.7 0.0047 P8 GC+SHH+1d culture GCCAAAATTT (6) 2.3 0.0023 P8 GC+SHH+1d culture GGGGAAAGAG (8) 1.2 0.0012 P8 GC+SHH+1d culture GTGATGTCTA (5) 1.2 0.0012 3T3 fibroblasts TATCAGCTCC (5) 7 0.007 E15 cortex TAGACCCAGG (3) 4.9 0.0049 P1 cortex TATCAGCTCC (5) 18.2 0.0182 P1 cortex GGGGACAGAG (5) 4.5 0.0045 Hypothalamus GCACAGATGA (4) 1.8 0.0018 E12.5 retina AGGAAAAGAA (6) 1.9 0.0019 E12.5 retina GTGATGTCTA (5) 1.9 0.0019 E12.5 retina TATCAGCTCC (5) 1.9 0.0019 E14.5 retina TGGTGTGTGT (8) 3.6 0.0036 E14.5 retina GTGATGTCTA (5) 1.8 0.0018 E14.5 retina TATCAGCTCC (5) 1.8 0.0018 E16.5 retina GCACAGATGA (4) 3.6 0.0036 E16.5 retina AGGCCTGGAA (4) 1.8 0.0018 E16.5 retina CCCCCCACCC (9) 1.8 0.0018 P0.5 retina GCCAAAATTT (6) 3.9 0.0039 P0.5 retina CCCCCCACCC (9) 2 0.002 P0.5 retina GCACAGATGA (4) 2 0.002 P0.5 retina TATCAGCTCC (5) 2 0.002 P2.5 retina GGGGAAAGAG (8) 3.5 0.0035 P2.5 retina CCCCCCACCC (9) 1.8 0.0018 P2.5 retina TATCAGCTCC (5) 1.8 0.0018 P4.5 retina GCCAAAATTT (6) 2 0.002 P6.5 retina GCCAAAATTT (6) 6.7 0.0067 P6.5 retina GCACAGATGA (4) 1.7 0.0017 P6.5 retina GGGGAAAGAG (8) 1.7 0.0017 P10.5 crx- retina GGGGACAGAG (5) 1.9 0.0019 P10.5 crx- retina TAGACCCAGG (3) 1.9 0.0019 P10.5 crx+ retina AGGCCTGGAA (4) 3.8 0.0038 P10.5 crx+ retina GGGGACAGAG (5) 1.9 0.0019 Adult retinal GGGGACAGAG (5) 3.7 0.0037 Adult retinal TAGACCCAGG (3) 1.9 0.0019 ONL GCACAGATGA (4) 3.8 0.0038 ONL GGGGACAGAG (5) 3.8 0.0038