Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271947	Stmn1	stathmin 1	4	4 D3 (4 65.7 cM)	16765
Gene Ontology	axonogenesis | cytoplasm | intracellular signaling cascade | microtubule depolymerization | mitotic spindle assembly | tubulin binding
Human Homolog	STMN1[stathmin 1/oncoprotein 18]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAAGGAGGT (5) 16.3 0.0163 P8 Cb GC AGGCGGAAGT 4.9 0.0049 P8 Cb GC AAACATTTAG (2) 3.3 0.0033 P8 Cb GC GGAAAGAAGA (12) 1.6 0.0016 Cb medulloblastoma TGTGAAAAAA (7) 4.6 0.0046 Cb medulloblastoma TGCAAACAGA (15) 2.3 0.0023 P8 GC+1d culture AGAAGGAGGT (5) 82.2 0.0822 P8 GC+1d culture GCATCTTCTG (4) 3.4 0.0034 P8 GC+1d culture CTGTTAAAAA (2) 1.1 0.0011 P8 GC+1d culture GGGCGGAGTT (2) 1.1 0.0011 P8 GC+1d culture TGTGAAAAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture AGAAGGAGGT (5) 51.5 0.0515 P8 GC+SHH+1d culture TGTGAAAAAA (7) 3.5 0.0035 P8 GC+SHH+1d culture GCATCTTCTG (4) 2.3 0.0023 P8 GC+SHH+1d culture GGGCGGAGTT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTCACAGGAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGCAAACAGA (15) 1.2 0.0012 3T3 fibroblasts AGAAGGAGGT (5) 14 0.014 3T3 fibroblasts GGGCGGAGTT (2) 3.5 0.0035 3T3 fibroblasts TGTGAAAAAA (7) 3.5 0.0035 E15 cortex AGAAGGAGGT (5) 143.5 0.1435 E15 cortex GGAAAGAAGA (12) 9.9 0.0099 E15 cortex AAACATTTAG (2) 4.9 0.0049 E15 cortex AGGCGGAAGT 4.9 0.0049 E15 cortex GCATCTTCTG (4) 4.9 0.0049 P1 cortex AGAAGGAGGT (5) 168.2 0.1682 P1 cortex AGGCGGAAGT 4.5 0.0045 Hypothalamus AGAAGGAGGT (5) 19.9 0.0199 Hypothalamus GTCACAGGAA (2) 3.6 0.0036 Hypothalamus AGGCGGAAGT 1.8 0.0018 Hypothalamus GCATCTTCTG (4) 1.8 0.0018 E12.5 retina AGAAGGAGGT (5) 22.5 0.0225 E12.5 retina GCATCTTCTG (4) 1.9 0.0019 E12.5 retina TGTTAAAAAA (4) 1.9 0.0019 E14.5 retina AGAAGGAGGT (5) 10.9 0.0109 E14.5 retina GCATCTTCTG (4) 7.3 0.0073 E14.5 retina TGCAAACAGA (15) 3.6 0.0036 E14.5 retina AAACATTTAG (2) 1.8 0.0018 E16.5 retina GCATCTTCTG (4) 19.9 0.0199 E16.5 retina AGAAGGAGGT (5) 16.3 0.0163 E18.5 retina AGAAGGAGGT (5) 34.6 0.0346 E18.5 retina TGTGAAAAAA (7) 1.8 0.0018 E18.5 retina TGTTAAAAAA (4) 1.8 0.0018 P0.5 retina AGAAGGAGGT (5) 115.8 0.1158 P0.5 retina AGGCGGAAGT 2 0.002 P2.5 retina AGAAGGAGGT (5) 28.2 0.0282 P4.5 retina AGAAGGAGGT (5) 13.9 0.0139 P4.5 retina TGTGAAAAAA (7) 7.9 0.0079 P4.5 retina CTGTTAAAAA (2) 4 0.004 P4.5 retina AGGCGGAAGT 2 0.002 P6.5 retina AGAAGGAGGT (5) 21.7 0.0217 P6.5 retina TGTGAAAAAA (7) 3.3 0.0033 P6.5 retina GGAAAGAAGA (12) 1.7 0.0017 P6.5 retina TGCAAACAGA (15) 1.7 0.0017 P10.5 crx- retina AGAAGGAGGT (5) 9.3 0.0093 P10.5 crx- retina GCATCTTCTG (4) 3.7 0.0037 P10.5 crx- retina TGCAAACAGA (15) 3.7 0.0037 P10.5 crx- retina AAACATTTAG (2) 1.9 0.0019 P10.5 crx- retina TGTGAAAAAA (7) 1.9 0.0019 P10.5 crx+ retina AGAAGGAGGT (5) 7.7 0.0077 P10.5 crx+ retina AAACATTTAG (2) 1.9 0.0019 P10.5 crx+ retina TGTGAAAAAA (7) 1.9 0.0019 P10.5 crx+ retina TGTTAAAAAA (4) 1.9 0.0019 Adult retinal TGTGAAAAAA (7) 5.6 0.0056 Adult retinal AGAAGGAGGT (5) 3.7 0.0037 ONL AGAAGGAGGT (5) 1.9 0.0019 ONL GCATCTTCTG (4) 1.9 0.0019