Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271956	C230096C10Rik	RIKEN cDNA C230096C10 gene	4		230866
Human Homolog	KIAA0090[KIAA0090 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 107 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACCTCTGG 1.6 0.0016 P8 Cb GC AGGCCCTGGG (6) 1.6 0.0016 P8 Cb GC GTGGCCCACA (5) 1.6 0.0016 Cb medulloblastoma AGACCTCTGG 9.2 0.0092 Cb medulloblastoma AAAGGAAAAA (15) 6.9 0.0069 Cb medulloblastoma AGGCCCTGGG (6) 2.3 0.0023 Cb medulloblastoma GACAAGATGC (4) 2.3 0.0023 Cb medulloblastoma GAGAAGTGCT (7) 2.3 0.0023 Cb medulloblastoma GTGGCCCACA (5) 2.3 0.0023 P8 GC+1d culture GTGGCCCACA (5) 5.7 0.0057 P8 GC+1d culture CCAGGCCAGT (4) 2.3 0.0023 P8 GC+1d culture GACAAGATGC (4) 2.3 0.0023 P8 GC+1d culture CGTTGCTGGG (2) 1.1 0.0011 P8 GC+1d culture GAGAAGTGCT (7) 1.1 0.0011 P8 GC+1d culture GTGAGATCCT (3) 1.1 0.0011 P8 GC+SHH+1d culture GTGGCCCACA (5) 9.4 0.0094 P8 GC+SHH+1d culture AAAGGAAAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture AGACCTCTGG 1.2 0.0012 P8 GC+SHH+1d culture AGGCCCTGGG (6) 1.2 0.0012 P8 GC+SHH+1d culture CCAGGCCAGT (4) 1.2 0.0012 P8 GC+SHH+1d culture CGTTGCTGGG (2) 1.2 0.0012 3T3 fibroblasts GTGGCCCACA (5) 21 0.021 3T3 fibroblasts GCTGGGCTAG 7 0.007 3T3 fibroblasts CCAGGCCAGT (4) 3.5 0.0035 3T3 fibroblasts CGTTGCTGGG (2) 3.5 0.0035 3T3 fibroblasts GACAAGATGC (4) 3.5 0.0035 3T3 fibroblasts GTGAGATCCT (3) 3.5 0.0035 E15 cortex GTGGCCCACA (5) 14.8 0.0148 E15 cortex AAAGGAAAAA (15) 4.9 0.0049 E15 cortex AGACCTCTGG 4.9 0.0049 E15 cortex CGTTGCTGGG (2) 4.9 0.0049 P1 cortex AGGCCCTGGG (6) 4.5 0.0045 P1 cortex CCAGGCCAGT (4) 4.5 0.0045 P1 cortex GAGAAGTGCT (7) 4.5 0.0045 Hypothalamus CCAGGCCAGT (4) 9.1 0.0091 Hypothalamus GTGGCCCACA (5) 9.1 0.0091 Hypothalamus GACAAGATGC (4) 7.2 0.0072 Hypothalamus AAAGGAAAAA (15) 1.8 0.0018 E12.5 retina CCAGGCCAGT (4) 7.5 0.0075 E12.5 retina GTGGCCCACA (5) 5.6 0.0056 E12.5 retina AGGCCCTGGG (6) 3.8 0.0038 E12.5 retina GTGAGATCCT (3) 1.9 0.0019 E14.5 retina GTGGCCCACA (5) 9.1 0.0091 E14.5 retina AGGCCCTGGG (6) 7.3 0.0073 E14.5 retina GACAAGATGC (4) 3.6 0.0036 E14.5 retina AGACCTCTGG 1.8 0.0018 E14.5 retina CCTGGTGCCC (10) 1.8 0.0018 E16.5 retina GTGGCCCACA (5) 10.9 0.0109 E16.5 retina GACAAGATGC (4) 7.2 0.0072 E16.5 retina CCAGGCCAGT (4) 5.4 0.0054 E16.5 retina AGGCCCTGGG (6) 3.6 0.0036 E16.5 retina AAAGGAAAAA (15) 1.8 0.0018 E16.5 retina AAGGTGCACC (3) 1.8 0.0018 E18.5 retina GTGGCCCACA (5) 10.9 0.0109 E18.5 retina AAAGGAAAAA (15) 3.6 0.0036 E18.5 retina AGGCCCTGGG (6) 1.8 0.0018 E18.5 retina CCAGGCCAGT (4) 1.8 0.0018 P0.5 retina CCAGGCCAGT (4) 9.8 0.0098 P0.5 retina CGTTGCTGGG (2) 7.9 0.0079 P0.5 retina GTGGCCCACA (5) 5.9 0.0059 P0.5 retina AGACCTCTGG 2 0.002 P0.5 retina AGGCCCTGGG (6) 2 0.002 P0.5 retina CCTGGTGCCC (10) 2 0.002 P0.5 retina GCTGGGCTAG 2 0.002 P2.5 retina CCAGGCCAGT (4) 7 0.007 P2.5 retina AGACCTCTGG 3.5 0.0035 P2.5 retina AGGCCCTGGG (6) 3.5 0.0035 P2.5 retina CGTTGCTGGG (2) 3.5 0.0035 P2.5 retina GACAAGATGC (4) 1.8 0.0018 P2.5 retina GAGAAGTGCT (7) 1.8 0.0018 P2.5 retina GCTGGGCTAG 1.8 0.0018 P2.5 retina GTGAGATCCT (3) 1.8 0.0018 P2.5 retina GTGGCCCACA (5) 1.8 0.0018 P4.5 retina GTGGCCCACA (5) 7.9 0.0079 P4.5 retina AGACCTCTGG 5.9 0.0059 P4.5 retina CCAGGCCAGT (4) 5.9 0.0059 P4.5 retina AAAGGAAAAA (15) 4 0.004 P4.5 retina AGGCCCTGGG (6) 4 0.004 P4.5 retina CGTTGCTGGG (2) 2 0.002 P4.5 retina GACAAGATGC (4) 2 0.002 P4.5 retina GCTGGGCTAG 2 0.002 P6.5 retina CCAGGCCAGT (4) 15 0.015 P6.5 retina GTGGCCCACA (5) 6.7 0.0067 P6.5 retina AGACCTCTGG 5 0.005 P6.5 retina AGGCCCTGGG (6) 1.7 0.0017 P10.5 crx- retina AGACCTCTGG 13 0.013 P10.5 crx- retina GTGGCCCACA (5) 9.3 0.0093 P10.5 crx- retina CCAGGCCAGT (4) 1.9 0.0019 P10.5 crx- retina CCTGGTGCCC (10) 1.9 0.0019 P10.5 crx- retina GACAAGATGC (4) 1.9 0.0019 P10.5 crx- retina GCTGGGCTAG 1.9 0.0019 P10.5 crx+ retina GTGGCCCACA (5) 13.5 0.0135 P10.5 crx+ retina AGACCTCTGG 9.6 0.0096 P10.5 crx+ retina CCAGGCCAGT (4) 7.7 0.0077 P10.5 crx+ retina AAAGGAAAAA (15) 1.9 0.0019 P10.5 crx+ retina AAGGTGCACC (3) 1.9 0.0019 Adult retinal CCAGGCCAGT (4) 7.4 0.0074 Adult retinal GTGGCCCACA (5) 5.6 0.0056 Adult retinal AAGGTGCACC (3) 3.7 0.0037 Adult retinal GCTGGGCTAG 3.7 0.0037 Adult retinal AGACCTCTGG 1.9 0.0019 ONL GTGGCCCACA (5) 5.7 0.0057 ONL AAGGTGCACC (3) 3.8 0.0038 ONL AGACCTCTGG 1.9 0.0019 ONL GACAAGATGC (4) 1.9 0.0019 ONL GCTGGGCTAG 1.9 0.0019 ONL GTGAGATCCT (3) 1.9 0.0019