Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.271967
Lasp1
LIM and SH3 protein 1
11
11 56.0 cM
16796
Human Homolog
LASP1[LIM and SH3 protein 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 79 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
P8 Cb GC
GATTTCTTAT (
3
)
1.6
0.0016
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
TCAGCGCAAA (
2
)
6.9
0.0069
Cb medulloblastoma
GTGGCAGACA (
2
)
2.3
0.0023
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+1d culture
GTGAGCGACA
(
2
)
6.8
0.0068
P8 GC+1d culture
AAGAAGAAGA (
9
)
2.3
0.0023
P8 GC+1d culture
GTGGCAGACA (
2
)
2.3
0.0023
P8 GC+1d culture
TCAGCGCAAA (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
P8 GC+SHH+1d culture
GTGGCAGACA (
2
)
4.7
0.0047
P8 GC+SHH+1d culture
TCAGCGCAAA (
2
)
4.7
0.0047
P8 GC+SHH+1d culture
GTGAGCGACA
(
2
)
2.3
0.0023
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
3T3 fibroblasts
GTGAGCGACA
(
2
)
14
0.014
3T3 fibroblasts
GTGGCAGACA (
2
)
3.5
0.0035
E15 cortex
GTGAGCGACA
(
2
)
9.9
0.0099
E15 cortex
GTGGCAGACA (
2
)
4.9
0.0049
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
P1 cortex
GTGAGCGACA
(
2
)
4.5
0.0045
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
GTGGCAGACA (
2
)
3.6
0.0036
Hypothalamus
TCAGCGCAAA (
2
)
3.6
0.0036
Hypothalamus
GGGCTCCTTG (
5
)
1.8
0.0018
Hypothalamus
GTGAGCGACA
(
2
)
1.8
0.0018
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E12.5 retina
AAGAAGAAGA (
9
)
1.9
0.0019
E12.5 retina
TCAGCGCAAA (
2
)
1.9
0.0019
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E14.5 retina
GGACACAGCT (
4
)
1.8
0.0018
E14.5 retina
GGGCTCCTTG (
5
)
1.8
0.0018
E14.5 retina
GTGAGCGACA
(
2
)
1.8
0.0018
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
GTGAGCGACA
(
2
)
3.6
0.0036
E16.5 retina
GTGGCAGACA (
2
)
3.6
0.0036
E16.5 retina
GGACACAGCT (
4
)
1.8
0.0018
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
E18.5 retina
GTGGCCGAAA
(
5
)
5.5
0.0055
E18.5 retina
GATTTCTTAT (
3
)
1.8
0.0018
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P0.5 retina
GTGGCAGACA (
2
)
7.9
0.0079
P0.5 retina
GTGAGCGACA
(
2
)
5.9
0.0059
P0.5 retina
TCAGCGCAAA (
2
)
3.9
0.0039
P0.5 retina
GTGGCCGAAA
(
5
)
2
0.002
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P2.5 retina
GTGGCCGAAA
(
5
)
10.6
0.0106
P2.5 retina
GTGAGCGACA
(
2
)
5.3
0.0053
P2.5 retina
GGGCTCCTTG (
5
)
1.8
0.0018
P2.5 retina
TCAGCGCAAA (
2
)
1.8
0.0018
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P4.5 retina
GTGGCCGAAA
(
5
)
7.9
0.0079
P4.5 retina
GTGAGCGACA
(
2
)
4
0.004
P4.5 retina
GTGGCAGACA (
2
)
4
0.004
P4.5 retina
TCAGCGCAAA (
2
)
2
0.002
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
TCAGCGCAAA (
2
)
5
0.005
P6.5 retina
GTGGCCGAAA
(
5
)
3.3
0.0033
P6.5 retina
AAGAAGAAGA (
9
)
1.7
0.0017
P6.5 retina
GTGAGCGACA
(
2
)
1.7
0.0017
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
GTGAGCGACA
(
2
)
5.6
0.0056
P10.5 crx- retina
GGACACAGCT (
4
)
1.9
0.0019
P10.5 crx- retina
GTGGCCGAAA
(
5
)
1.9
0.0019
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
P10.5 crx+ retina
GTGGCCGAAA
(
5
)
7.7
0.0077
P10.5 crx+ retina
GTGGCAGACA (
2
)
5.8
0.0058
P10.5 crx+ retina
GTGAGCGACA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TCAGCGCAAA (
2
)
1.9
0.0019
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
Adult retinal
GTGGCAGACA (
2
)
5.6
0.0056
Adult retinal
GTGAGCGACA
(
2
)
3.7
0.0037
Adult retinal
GTGGCCGAAA
(
5
)
3.7
0.0037
Adult retinal
GGGCTCCTTG (
5
)
1.9
0.0019
Adult retinal
TCAGCGCAAA (
2
)
1.9
0.0019
ONL
TGTGTGTGTG (
115
)
23
0.023
ONL
GTGGCCGAAA
(
5
)
3.8
0.0038
ONL
GTGGCAGACA (
2
)
1.9
0.0019
ONL
TCAGCGCAAA (
2
)
1.9
0.0019
