Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.271988
4930403J22Rik
RIKEN cDNA 4930403J22 gene
14
70551
Human Homolog
FLJ14624[hypothetical protein FLJ14624]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 55 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
AGAAAAAAAA (
47
)
17.9
0.0179
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AGAAAAAAAA (
47
)
53.2
0.0532
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AGAAAAAAAA (
47
)
8
0.008
P8 GC+1d culture
GAAGAAAAAA (
18
)
1.1
0.0011
P8 GC+1d culture
GGAGTCCATA
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
AGAAAAAAAA (
47
)
14.1
0.0141
P8 GC+SHH+1d culture
GAAGAAAAAA (
18
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
AGAAAAAAAA (
47
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
AGAAAAAAAA (
47
)
14.8
0.0148
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
AGAAAAAAAA (
47
)
9.1
0.0091
P1 cortex
CCTCCTACAA
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
AGAAAAAAAA (
47
)
32.6
0.0326
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
AGAAAAAAAA (
47
)
20.7
0.0207
E12.5 retina
GAAGAAAAAA (
18
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
AGAAAAAAAA (
47
)
20
0.02
E14.5 retina
GAAGAAAAAA (
18
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
AGAAAAAAAA (
47
)
10.9
0.0109
E16.5 retina
GGAGTCCATA
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
AGAAAAAAAA (
47
)
29.1
0.0291
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
AGAAAAAAAA (
47
)
13.7
0.0137
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
AGAAAAAAAA (
47
)
17.6
0.0176
P2.5 retina
GAAGAAAAAA (
18
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AGAAAAAAAA (
47
)
31.7
0.0317
P4.5 retina
CCTCCTACAA
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AGAAAAAAAA (
47
)
13.3
0.0133
P6.5 retina
GAAGAAAAAA (
18
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
AGAAAAAAAA (
47
)
7.4
0.0074
P10.5 crx- retina
GGAGTCCATA
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
AGAAAAAAAA (
47
)
5.8
0.0058
P10.5 crx+ retina
CCTCCTACAA
1.9
0.0019
P10.5 crx+ retina
GGAGTCCATA
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AGAAAAAAAA (
47
)
5.6
0.0056
Adult retinal
GGAGTCCATA
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
AGAAAAAAAA (
47
)
19.2
0.0192
ONL
GAAGAAAAAA (
18
)
1.9
0.0019
