Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27199	Cbara1	calcium binding atopy-related autoantigen 1	10		216001
Gene Ontology	biological_process unknown | cellular_component unknown
Human Homolog	CBARA1[calcium binding atopy-related autoantigen 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTAACA (10) 6.5 0.0065 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC TATTGGGGAT (2) 3.3 0.0033 P8 Cb GC GAGCCCCTGG (5) 1.6 0.0016 Cb medulloblastoma GTGGCTAACA (10) 13.9 0.0139 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GTGGCTAACA (10) 8 0.008 P8 GC+1d culture CTGCTGATGC (4) 2.3 0.0023 P8 GC+1d culture TATTGGGGAT (2) 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTAACA (10) 11.7 0.0117 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GAGCCCCTGG (5) 3.5 0.0035 3T3 fibroblasts GTGGCTAACA (10) 10.5 0.0105 3T3 fibroblasts CTGCTGATGC (4) 3.5 0.0035 3T3 fibroblasts GAGCCCCTGG (5) 3.5 0.0035 E15 cortex GTGGCTAACA (10) 9.9 0.0099 E15 cortex CTGCTGATGC (4) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GTGGCTAACA (10) 9.1 0.0091 P1 cortex GAGCCCCTGG (5) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus GTGGCTAACA (10) 25.4 0.0254 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CTGCTGATGC (4) 3.6 0.0036 Hypothalamus CAGAGACAGC (4) 1.8 0.0018 E12.5 retina GTGGCTAACA (10) 15 0.015 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina TATTGGGGAT (2) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GTGGCTAACA (10) 14.6 0.0146 E14.5 retina CAGAGACAGC (4) 1.8 0.0018 E14.5 retina CTGCTGATGC (4) 1.8 0.0018 E14.5 retina GAGCCCCTGG (5) 1.8 0.0018 E16.5 retina GTGGCTAACA (10) 30.8 0.0308 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CAGAGACAGC (4) 3.6 0.0036 E16.5 retina TATTGGGGAT (2) 1.8 0.0018 E18.5 retina GTGGCTAACA (10) 12.7 0.0127 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina CTGCTGATGC (4) 3.6 0.0036 E18.5 retina TATTGGGGAT (2) 1.8 0.0018 P0.5 retina GTGGCTAACA (10) 13.7 0.0137 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CTGCTGATGC (4) 3.9 0.0039 P0.5 retina GAGCCCCTGG (5) 2 0.002 P0.5 retina TATTGGGGAT (2) 2 0.002 P2.5 retina GTGGCTAACA (10) 10.6 0.0106 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GAGCCCCTGG (5) 1.8 0.0018 P4.5 retina GTGGCTAACA (10) 17.8 0.0178 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina CTGCTGATGC (4) 4 0.004 P6.5 retina GTGGCTAACA (10) 15 0.015 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina CTGCTGATGC (4) 3.3 0.0033 P6.5 retina CAGAGACAGC (4) 1.7 0.0017 P10.5 crx- retina GTGGCTAACA (10) 3.7 0.0037 P10.5 crx- retina CTGCTGATGC (4) 1.9 0.0019 P10.5 crx+ retina GTGGCTAACA (10) 11.5 0.0115 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CTGCTGATGC (4) 1.9 0.0019 Adult retinal GTGGCTAACA (10) 11.1 0.0111 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CTGCTGATGC (4) 1.9 0.0019 Adult retinal TATTGGGGAT (2) 1.9 0.0019 ONL GTGGCTAACA (10) 7.7 0.0077 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL CAGAGACAGC (4) 1.9 0.0019 ONL GAGCCCCTGG (5) 1.9 0.0019