Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27227
5730469M10Rik
RIKEN cDNA 5730469M10 gene
14
70564
Human Homolog
C10orf58[chromosome 10 open reading frame 58]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
P8 Cb GC
AAAATAAACT (
4
)
1.6
0.0016
P8 Cb GC
GCCCTAAGTG
(
2
)
1.6
0.0016
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
Cb medulloblastoma
GCCCTAAGTG
(
2
)
9.2
0.0092
Cb medulloblastoma
TTTCTGTCCA
2.3
0.0023
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
AAGGAAGAGG (
10
)
2.3
0.0023
P8 GC+1d culture
GGCCTCATCC
(
4
)
2.3
0.0023
P8 GC+1d culture
AAAATAAACT (
4
)
1.1
0.0011
P8 GC+1d culture
GCCCTAAGTG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
GCCCTAAGTG
(
2
)
1.2
0.0012
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
3T3 fibroblasts
GCCCTAAGTG
(
2
)
14
0.014
3T3 fibroblasts
TTTCTGTCCA
3.5
0.0035
E15 cortex
GCCCTAAGTG
(
2
)
9.9
0.0099
E15 cortex
CACACACACA (
106
)
4.9
0.0049
P1 cortex
CACACACACA (
106
)
27.3
0.0273
P1 cortex
GCCCTAAGTG
(
2
)
9.1
0.0091
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
GCCCTAAGTG
(
2
)
3.6
0.0036
Hypothalamus
AAAATAAACT (
4
)
1.8
0.0018
Hypothalamus
GGCCTCATCC
(
4
)
1.8
0.0018
Hypothalamus
TTTCTGTCCA
1.8
0.0018
E12.5 retina
GCCCTAAGTG
(
2
)
5.6
0.0056
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E12.5 retina
AAAATAAACT (
4
)
1.9
0.0019
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E14.5 retina
AAAATAAACT (
4
)
7.3
0.0073
E14.5 retina
GCCCTAAGTG
(
2
)
1.8
0.0018
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E16.5 retina
AAAATAAACT (
4
)
3.6
0.0036
E16.5 retina
GCCCTAAGTG
(
2
)
1.8
0.0018
E18.5 retina
AAAATAAACT (
4
)
5.5
0.0055
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
GCCCTAAGTG
(
2
)
3.6
0.0036
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P0.5 retina
GCCCTAAGTG
(
2
)
5.9
0.0059
P0.5 retina
AAAATAAACT (
4
)
2
0.002
P0.5 retina
AAGGAAGAGG (
10
)
2
0.002
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P2.5 retina
AAAATAAACT (
4
)
5.3
0.0053
P2.5 retina
GCCCTAAGTG
(
2
)
3.5
0.0035
P2.5 retina
GGCCTCATCC
(
4
)
1.8
0.0018
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P4.5 retina
AAAATAAACT (
4
)
4
0.004
P4.5 retina
GCCCTAAGTG
(
2
)
4
0.004
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P6.5 retina
GCCCTAAGTG
(
2
)
3.3
0.0033
P6.5 retina
AAAATAAACT (
4
)
1.7
0.0017
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
GCCCTAAGTG
(
2
)
1.9
0.0019
P10.5 crx- retina
GGCCTCATCC
(
4
)
1.9
0.0019
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
GCCCTAAGTG
(
2
)
7.7
0.0077
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
GCCCTAAGTG
(
2
)
3.7
0.0037
Adult retinal
GGCCTCATCC
(
4
)
1.9
0.0019
ONL
CACACACACA (
106
)
21.1
0.0211
ONL
AAAATAAACT (
4
)
1.9
0.0019
