Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.272389
2900010M23Rik
RIKEN cDNA 2900010M23 gene
17
67267
Mm.272389
AL117801
expressed sequence AL117801
17
404588
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGAAGAAAC
(
7
)
8.2
0.0082
Cb medulloblastoma
TGGAAGAAAC
(
7
)
37
0.037
Cb medulloblastoma
TTGGAAGAAA
(
3
)
2.3
0.0023
P8 GC+1d culture
TGGAAGAAAC
(
7
)
6.8
0.0068
P8 GC+SHH+1d culture
TGGAAGAAAC
(
7
)
9.4
0.0094
P8 GC+SHH+1d culture
ACTAGTGCTT
(
80
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGCATAACC
(
3
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
TGGAAGAAAC
(
7
)
7
0.007
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
Hypothalamus
TGGAAGAAAC
(
7
)
19.9
0.0199
Hypothalamus
TGGCATAACC
(
3
)
1.8
0.0018
E12.5 retina
TGGAAGAAAC
(
7
)
18.8
0.0188
E12.5 retina
ACTAGTGCTT
(
80
)
1.9
0.0019
E12.5 retina
TGGCATAACC
(
3
)
1.9
0.0019
E14.5 retina
TGGAAGAAAC
(
7
)
5.5
0.0055
E14.5 retina
TTGGAAGAAA
(
3
)
1.8
0.0018
E16.5 retina
TGGAAGAAAC
(
7
)
16.3
0.0163
E16.5 retina
CTCTTATTCA
(
4
)
3.6
0.0036
E16.5 retina
TGGCATAACC
(
3
)
1.8
0.0018
E16.5 retina
TTGGAAGAAA
(
3
)
1.8
0.0018
E18.5 retina
TGGAAGAAAC
(
7
)
7.3
0.0073
E18.5 retina
TGGCATAACC
(
3
)
3.6
0.0036
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
TGGAAGAAAC
(
7
)
2
0.002
P2.5 retina
TGGAAGAAAC
(
7
)
10.6
0.0106
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
TGGAAGAAAC
(
7
)
7.9
0.0079
P4.5 retina
ACTAGTGCTT
(
80
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
TGGCATAACC
(
3
)
2
0.002
P6.5 retina
TGGAAGAAAC
(
7
)
8.3
0.0083
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
TTGGAAGAAA
(
3
)
1.7
0.0017
P10.5 crx- retina
TGGAAGAAAC
(
7
)
31.6
0.0316
P10.5 crx- retina
CTCTTATTCA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGGAAGAAAC
(
7
)
9.6
0.0096
Adult retinal
TGGAAGAAAC
(
7
)
5.6
0.0056
Adult retinal
CTCTTATTCA
(
4
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
TGGAAGAAAC
(
7
)
7.7
0.0077
ONL
GTCATAGCTG (
590
)
5.7
0.0057
