Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.272801
Dctn4
dynactin 4
18
67665
Mm.272801
C130039E17Rik
RIKEN cDNA C130039E17 gene
18
319993
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TTATAGGCAT
(
2
)
6.5
0.0065
P8 Cb GC
AAACAATATT
(
3
)
1.6
0.0016
P8 Cb GC
TAACTCTTGC
(
4
)
1.6
0.0016
P8 Cb GC
TCACTGAAAG
(
2
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TTATAGGCAT
(
2
)
4.6
0.0046
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TAACTCTTGC
(
4
)
2.3
0.0023
P8 GC+1d culture
AAACAATATT
(
3
)
1.1
0.0011
P8 GC+1d culture
TATTTGGAAC
(
6
)
1.1
0.0011
P8 GC+1d culture
TTATAGGCAT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TAACTCTTGC
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
TATTTGGAAC
(
6
)
3.5
0.0035
P8 GC+SHH+1d culture
AAATTCTATT
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TATTTGGAAC
(
6
)
9.1
0.0091
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TATTTGGAAC
(
6
)
1.8
0.0018
Hypothalamus
TTATAGGCAT
(
2
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GAGCGAGCCT
(
2
)
1.9
0.0019
E12.5 retina
TCACTGAAAG
(
2
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
AAACAATATT
(
3
)
1.8
0.0018
E14.5 retina
TAACTCTTGC
(
4
)
1.8
0.0018
E14.5 retina
TTATAGGCAT
(
2
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GAGCGAGCCT
(
2
)
1.8
0.0018
E16.5 retina
TATTTGGAAC
(
6
)
1.8
0.0018
E16.5 retina
TTATAGGCAT
(
2
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TAACTCTTGC
(
4
)
1.8
0.0018
E18.5 retina
TTATAGGCAT
(
2
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TAACTCTTGC
(
4
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TAACTCTTGC
(
4
)
5.3
0.0053
P2.5 retina
TTATAGGCAT
(
2
)
5.3
0.0053
P2.5 retina
AAATTCTATT
(
2
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TAACTCTTGC
(
4
)
4
0.004
P4.5 retina
TATTTGGAAC
(
6
)
4
0.004
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AAATTCTATT
(
2
)
1.7
0.0017
P6.5 retina
TATTTGGAAC
(
6
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
TTATAGGCAT
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TAACTCTTGC
(
4
)
5.8
0.0058
P10.5 crx+ retina
TCACTGAAAG
(
2
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TCACTGAAAG
(
2
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
AAACAATATT
(
3
)
3.8
0.0038
ONL
GAGCGAGCCT
(
2
)
1.9
0.0019
ONL
TTATAGGCAT
(
2
)
1.9
0.0019
