Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273098	Agrn	agrin	4	4 E2 (4 80.0 cM)	11603
Gene Ontology	acetylcholine receptor regulator activity | extracellular space | neurotransmitter receptor metabolism | plasma membrane organization and biogenesis | synaptic transmission
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 15 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAAGTC (3) 8.2 0.0082 P8 Cb GC AAATAAAGTT (5) 3.3 0.0033 P8 Cb GC GAGGTGGTGG (8) 1.6 0.0016 Cb medulloblastoma AACTGGGTCT (6) 6.9 0.0069 Cb medulloblastoma AAATAAAGTC (3) 4.6 0.0046 P8 GC+1d culture AAATAAAGTC (3) 8 0.008 P8 GC+1d culture GGGAGTGCAT (2) 6.8 0.0068 P8 GC+1d culture AACTGGGTCT (6) 4.6 0.0046 P8 GC+1d culture AAATAAAGTT (5) 2.3 0.0023 P8 GC+1d culture CAGCTCCCTC (3) 2.3 0.0023 P8 GC+1d culture GCTTGTGACT (2) 1.1 0.0011 P8 GC+SHH+1d culture AAATAAAGTC (3) 8.2 0.0082 P8 GC+SHH+1d culture GGGAGTGCAT (2) 7 0.007 P8 GC+SHH+1d culture AACTGGGTCT (6) 4.7 0.0047 P8 GC+SHH+1d culture AAATAAAGTT (5) 2.3 0.0023 P8 GC+SHH+1d culture GCGGGGGCCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTCAGCCCC (2) 1.2 0.0012 3T3 fibroblasts GCTCAGCCCC (2) 7 0.007 3T3 fibroblasts AACTGGGTCT (6) 3.5 0.0035 3T3 fibroblasts ATCAACCTCA (2) 3.5 0.0035 3T3 fibroblasts GAGGTGGTGG (8) 3.5 0.0035 E15 cortex AACTGGGTCT (6) 4.9 0.0049 E15 cortex GAGGTGGTGG (8) 4.9 0.0049 P1 cortex AAATAAAGTC (3) 9.1 0.0091 P1 cortex AACTGGGTCT (6) 9.1 0.0091 P1 cortex ATCAACCTCA (2) 4.5 0.0045 Hypothalamus AAATAAAGTC (3) 12.7 0.0127 Hypothalamus AACTGGGTCT (6) 5.4 0.0054 Hypothalamus AAATAAAGTT (5) 3.6 0.0036 Hypothalamus GCGGGGGCCA (2) 1.8 0.0018 Hypothalamus GCTCAGCCCC (2) 1.8 0.0018 Hypothalamus GGGAGTGCAT (2) 1.8 0.0018 E12.5 retina AAATAAAGTC (3) 24.4 0.0244 E12.5 retina AAATAAAGTT (5) 1.9 0.0019 E12.5 retina AACTGGGTCT (6) 1.9 0.0019 E12.5 retina ATCAACCTCA (2) 1.9 0.0019 E12.5 retina GCTCAGCCCC (2) 1.9 0.0019 E14.5 retina AAATAAAGTC (3) 36.4 0.0364 E14.5 retina CAGCTCCCTC (3) 7.3 0.0073 E14.5 retina AACTGGGTCT (6) 3.6 0.0036 E16.5 retina AAATAAAGTC (3) 39.8 0.0398 E16.5 retina CAGCTCCCTC (3) 7.2 0.0072 E16.5 retina AACTGGGTCT (6) 3.6 0.0036 E16.5 retina GGGGCTCAAA (3) 3.6 0.0036 E16.5 retina AAATAAAGTT (5) 1.8 0.0018 E18.5 retina AAATAAAGTC (3) 40 0.04 E18.5 retina AACTGGGTCT (6) 3.6 0.0036 E18.5 retina GGGGCTCAAA (3) 1.8 0.0018 P0.5 retina AAATAAAGTC (3) 19.6 0.0196 P0.5 retina GGGGCTCAAA (3) 3.9 0.0039 P0.5 retina AACTGGGTCT (6) 2 0.002 P2.5 retina AAATAAAGTC (3) 28.2 0.0282 P2.5 retina CAGCTCCCTC (3) 1.8 0.0018 P2.5 retina GCGGGGGCCA (2) 1.8 0.0018 P2.5 retina GCTTGTGACT (2) 1.8 0.0018 P2.5 retina GGGAGTGCAT (2) 1.8 0.0018 P4.5 retina AAATAAAGTC (3) 35.7 0.0357 P4.5 retina AACTGGGTCT (6) 5.9 0.0059 P4.5 retina AAATAAAGTT (5) 2 0.002 P4.5 retina ATCAACCTCA (2) 2 0.002 P4.5 retina CAGCTCCCTC (3) 2 0.002 P4.5 retina GGGAGTGCAT (2) 2 0.002 P6.5 retina AAATAAAGTC (3) 43.4 0.0434 P6.5 retina GGGAGTGCAT (2) 3.3 0.0033 P6.5 retina GGGGCTCAAA (3) 3.3 0.0033 P6.5 retina AAATAAAGTT (5) 1.7 0.0017 P6.5 retina CAGCTCCCTC (3) 1.7 0.0017 P6.5 retina GCGGGGGCCA (2) 1.7 0.0017 P6.5 retina GCTTGTGACT (2) 1.7 0.0017 P10.5 crx- retina AAATAAAGTC (3) 14.9 0.0149 P10.5 crx- retina AACTGGGTCT (6) 11.1 0.0111 P10.5 crx- retina CAGCTCCCTC (3) 3.7 0.0037 P10.5 crx- retina GGGAGTGCAT (2) 1.9 0.0019 P10.5 crx+ retina AAATAAAGTC (3) 15.4 0.0154 P10.5 crx+ retina AACTGGGTCT (6) 7.7 0.0077 P10.5 crx+ retina AAATAAAGTT (5) 1.9 0.0019 P10.5 crx+ retina CAGCTCCCTC (3) 1.9 0.0019 P10.5 crx+ retina GGGAGTGCAT (2) 1.9 0.0019 P10.5 crx+ retina GGGGCTCAAA (3) 1.9 0.0019 Adult retinal AACTGGGTCT (6) 11.1 0.0111 Adult retinal GGGAGTGCAT (2) 7.4 0.0074 Adult retinal AAATAAAGTC (3) 3.7 0.0037 Adult retinal GCGGGGGCCA (2) 1.9 0.0019 Adult retinal GCTCAGCCCC (2) 1.9 0.0019 Adult retinal GGGGCTCAAA (3) 1.9 0.0019 ONL AACTGGGTCT (6) 26.8 0.0268 ONL AAATAAAGTT (5) 1.9 0.0019 ONL GGGAGTGCAT (2) 1.9 0.0019 ONL GGGGCTCAAA (3) 1.9 0.0019