Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27338	1810054O13Rik	RIKEN cDNA 1810054O13 gene	7	7	67893
Human Homolog	FLJ90119[hypothetical protein FLJ90119]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATACAATAAA (5) 19.6 0.0196 P8 Cb GC CGGCCACTGG (4) 13.1 0.0131 P8 Cb GC GTGTCCGGTT (4) 3.3 0.0033 P8 Cb GC TGAAAAAATA 1.6 0.0016 Cb medulloblastoma ATACAATAAA (5) 6.9 0.0069 Cb medulloblastoma TGGCCACTGG (9) 4.6 0.0046 Cb medulloblastoma CGGCCACTGG (4) 2.3 0.0023 Cb medulloblastoma GAGAGACAGC (4) 2.3 0.0023 Cb medulloblastoma GTGTCCGGTT (4) 2.3 0.0023 Cb medulloblastoma TGAAAAAATA 2.3 0.0023 P8 GC+1d culture CGGCCACTGG (4) 16 0.016 P8 GC+1d culture ATACAATAAA (5) 8 0.008 P8 GC+1d culture GTGTCCGGTT (4) 2.3 0.0023 P8 GC+1d culture TGAAAAAATA 2.3 0.0023 P8 GC+1d culture CCAAAGGAAG (6) 1.1 0.0011 P8 GC+1d culture TGGCCACTGG (9) 1.1 0.0011 P8 GC+SHH+1d culture ATACAATAAA (5) 18.7 0.0187 P8 GC+SHH+1d culture CGGCCACTGG (4) 12.9 0.0129 P8 GC+SHH+1d culture GTGTCCGGTT (4) 4.7 0.0047 P8 GC+SHH+1d culture TGAAAAAATA 2.3 0.0023 3T3 fibroblasts CGGCCACTGG (4) 38.6 0.0386 3T3 fibroblasts ATACAATAAA (5) 3.5 0.0035 E15 cortex CGGCCACTGG (4) 4.9 0.0049 E15 cortex GAGAGACAGC (4) 4.9 0.0049 P1 cortex ATACAATAAA (5) 13.6 0.0136 P1 cortex CCAAAGGAAG (6) 4.5 0.0045 P1 cortex CGGCCACTGG (4) 4.5 0.0045 Hypothalamus CGGCCACTGG (4) 12.7 0.0127 Hypothalamus ATACAATAAA (5) 10.9 0.0109 Hypothalamus TGAAAAAATA 3.6 0.0036 Hypothalamus TGGCCACTGG (9) 1.8 0.0018 E12.5 retina ATACAATAAA (5) 22.5 0.0225 E12.5 retina CGGCCACTGG (4) 15 0.015 E12.5 retina GTGTCCGGTT (4) 3.8 0.0038 E12.5 retina TGAAAAAATA 1.9 0.0019 E14.5 retina ATACAATAAA (5) 69.2 0.0692 E14.5 retina CGGCCACTGG (4) 7.3 0.0073 E14.5 retina TGAAAAAATA 1.8 0.0018 E16.5 retina ATACAATAAA (5) 34.4 0.0344 E16.5 retina CGGCCACTGG (4) 9.1 0.0091 E16.5 retina TGAAAAAATA 3.6 0.0036 E16.5 retina CCAAAGGAAG (6) 1.8 0.0018 E18.5 retina ATACAATAAA (5) 61.8 0.0618 E18.5 retina CGGCCACTGG (4) 5.5 0.0055 E18.5 retina GGCTGGAGAG (5) 1.8 0.0018 E18.5 retina GTGTCCGGTT (4) 1.8 0.0018 E18.5 retina TGAAAAAATA 1.8 0.0018 P0.5 retina ATACAATAAA (5) 11.8 0.0118 P0.5 retina CGGCCACTGG (4) 7.9 0.0079 P0.5 retina TGAAAAAATA 2 0.002 P0.5 retina TGGCCACTGG (9) 2 0.002 P2.5 retina ATACAATAAA (5) 14.1 0.0141 P2.5 retina CGGCCACTGG (4) 8.8 0.0088 P2.5 retina TGAAAAAATA 3.5 0.0035 P2.5 retina GGCTGGAGAG (5) 1.8 0.0018 P2.5 retina GTGTCCGGTT (4) 1.8 0.0018 P2.5 retina TGGCCACTGG (9) 1.8 0.0018 P4.5 retina TGAAAAAATA 27.7 0.0277 P4.5 retina ATACAATAAA (5) 23.8 0.0238 P4.5 retina CGGCCACTGG (4) 4 0.004 P4.5 retina GAGAGACAGC (4) 2 0.002 P4.5 retina GTGTCCGGTT (4) 2 0.002 P6.5 retina TGAAAAAATA 13.3 0.0133 P6.5 retina ATACAATAAA (5) 3.3 0.0033 P6.5 retina CGGCCACTGG (4) 3.3 0.0033 P6.5 retina TGGCCACTGG (9) 1.7 0.0017 P10.5 crx- retina TGAAAAAATA 11.1 0.0111 P10.5 crx- retina CGGCCACTGG (4) 9.3 0.0093 P10.5 crx- retina ATACAATAAA (5) 1.9 0.0019 P10.5 crx- retina GTGTCCGGTT (4) 1.9 0.0019 P10.5 crx- retina TGGCCACTGG (9) 1.9 0.0019 P10.5 crx+ retina CGGCCACTGG (4) 15.4 0.0154 P10.5 crx+ retina GTGTCCGGTT (4) 7.7 0.0077 P10.5 crx+ retina ATACAATAAA (5) 1.9 0.0019 P10.5 crx+ retina TGAAAAAATA 1.9 0.0019 Adult retinal CGGCCACTGG (4) 5.6 0.0056 Adult retinal GTGTCCGGTT (4) 3.7 0.0037 ONL ATACAATAAA (5) 7.7 0.0077 ONL GGCTGGAGAG (5) 3.8 0.0038 ONL TGAAAAAATA 3.8 0.0038 ONL CGGCCACTGG (4) 1.9 0.0019 ONL GTGTCCGGTT (4) 1.9 0.0019