Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273403	Cox5a	cytochrome c oxidase, subunit Va	9	11 56.0 cM	12858
Gene Ontology	cytochrome-c oxidase activity | electron transport | inner membrane | mitochondrion | oxidoreductase activity | respiratory chain complex IV (sensu Eukarya)
Human Homolog	COX5A[cytochrome c oxidase subunit Va]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAATAGTAAC (2) 24.5 0.0245 P8 Cb GC CACTGCCGTC (3) 1.6 0.0016 Cb medulloblastoma TAATAGTAAC (2) 62.4 0.0624 Cb medulloblastoma CTCGCAATGC (5) 2.3 0.0023 Cb medulloblastoma TGATAGTAAC 2.3 0.0023 P8 GC+1d culture TAATAGTAAC (2) 32 0.032 P8 GC+1d culture GTTTGATACT 3.4 0.0034 P8 GC+1d culture GAAATAATAA (4) 1.1 0.0011 P8 GC+1d culture TAAATAAGTA (2) 1.1 0.0011 P8 GC+SHH+1d culture TAATAGTAAC (2) 49.2 0.0492 P8 GC+SHH+1d culture TAAATAAGTA (2) 2.3 0.0023 P8 GC+SHH+1d culture CACTGCCGTC (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAATAATAA (4) 1.2 0.0012 P8 GC+SHH+1d culture GTTTGATACT 1.2 0.0012 3T3 fibroblasts CACTGCCGTC (3) 3.5 0.0035 3T3 fibroblasts GACACCGAGA (5) 3.5 0.0035 3T3 fibroblasts GTTTGATACT 3.5 0.0035 P1 cortex TAATAGTAAC (2) 18.2 0.0182 Hypothalamus TAATAGTAAC (2) 68.8 0.0688 Hypothalamus CACTGCCGTC (3) 3.6 0.0036 Hypothalamus CTCGCAATGC (5) 3.6 0.0036 Hypothalamus GTTTGATACT 3.6 0.0036 Hypothalamus GAAATAATAA (4) 1.8 0.0018 Hypothalamus TAAATAAGTA (2) 1.8 0.0018 Hypothalamus TAATTGTAAC (2) 1.8 0.0018 E12.5 retina TAATAGTAAC (2) 18.8 0.0188 E12.5 retina TAATAGTAAT (3) 1.9 0.0019 E14.5 retina TAATAGTAAC (2) 31 0.031 E16.5 retina TAATAGTAAC (2) 21.7 0.0217 E16.5 retina GACACCGAGA (5) 3.6 0.0036 E16.5 retina CTCGCAATGC (5) 1.8 0.0018 E16.5 retina GAAATAATAA (4) 1.8 0.0018 E16.5 retina GTTTGATACT 1.8 0.0018 E16.5 retina TGATAGTAAC 1.8 0.0018 E18.5 retina TAATAGTAAC (2) 61.8 0.0618 E18.5 retina GTTTGATACT 1.8 0.0018 E18.5 retina TAGACGGTTA 1.8 0.0018 P0.5 retina TAATAGTAAC (2) 7.9 0.0079 P0.5 retina GTTTGATACT 3.9 0.0039 P0.5 retina CACTGCCGTC (3) 2 0.002 P0.5 retina TAATAGAACT (2) 2 0.002 P2.5 retina TAATAGTAAC (2) 22.9 0.0229 P2.5 retina GAAATAATAA (4) 1.8 0.0018 P2.5 retina TAATAGTAAT (3) 1.8 0.0018 P2.5 retina TGATAGTAAC 1.8 0.0018 P4.5 retina TAATAGTAAC (2) 23.8 0.0238 P4.5 retina GAAATAATAA (4) 4 0.004 P4.5 retina GTTTGATACT 2 0.002 P4.5 retina TAAATAAGTA (2) 2 0.002 P6.5 retina TAATAGTAAC (2) 26.7 0.0267 P6.5 retina TAAATAAGTA (2) 1.7 0.0017 P10.5 crx- retina TAATAGTAAC (2) 14.9 0.0149 P10.5 crx- retina GAAATAATAA (4) 1.9 0.0019 P10.5 crx- retina TAGACGGTTA 1.9 0.0019 P10.5 crx+ retina TAATAGTAAC (2) 13.5 0.0135 P10.5 crx+ retina GAAATAATAA (4) 3.8 0.0038 P10.5 crx+ retina CACTGCCGTC (3) 1.9 0.0019 Adult retinal TAATAGTAAC (2) 11.1 0.0111 ONL TAATAGTAAC (2) 13.4 0.0134 ONL GAAATAATAA (4) 1.9 0.0019 ONL TAATAGAACT (2) 1.9 0.0019 ONL TAGACGGTTA 1.9 0.0019