Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273662	Hspg2	perlecan (heparan sulfate proteoglycan 2)	4	4 71.4 cM	15530
Gene Ontology	basement membrane | cell adhesion | extracellular matrix | extracellular space | protein binding | protein localization | structural molecule activity
Human Homolog	HSPG2[heparan sulfate proteoglycan 2 (perlecan)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCTGGCAG (10) 1.6 0.0016 Cb medulloblastoma GCCCTGGCAG (10) 2.3 0.0023 P8 GC+1d culture GCCCTGGCAG (10) 3.4 0.0034 P8 GC+1d culture GCTGTGTGGG (5) 3.4 0.0034 P8 GC+1d culture TCCTTGGCAG (6) 2.3 0.0023 P8 GC+SHH+1d culture GCTGTGTGGG (5) 4.7 0.0047 P8 GC+SHH+1d culture GCCCTGGCAG (10) 2.3 0.0023 P8 GC+SHH+1d culture GGCTGAGCCA (2) 1.2 0.0012 P8 GC+SHH+1d culture TCCTTGGCAG (6) 1.2 0.0012 3T3 fibroblasts GGCTGAGCCA (2) 3.5 0.0035 E15 cortex GCCCTGGCAG (10) 9.9 0.0099 P1 cortex GGCTGAGCCA (2) 4.5 0.0045 Hypothalamus GCCCTGGCAG (10) 1.8 0.0018 E14.5 retina GGCTGAGCCA (2) 1.8 0.0018 E16.5 retina TCCTTGGCAG (6) 3.6 0.0036 E16.5 retina GCTGTGTGGG (5) 1.8 0.0018 E16.5 retina GGCTGAGCCA (2) 1.8 0.0018 E18.5 retina GCCCTGGCAG (10) 1.8 0.0018 E18.5 retina GCTGTGTGGG (5) 1.8 0.0018 P0.5 retina AGTTATGGTA (3) 2 0.002 P2.5 retina GCCCTGGCAG (10) 3.5 0.0035 P2.5 retina AGTTATGGTA (3) 1.8 0.0018 P2.5 retina GCTGTGTGGG (5) 1.8 0.0018 P4.5 retina AGTTATGGTA (3) 7.9 0.0079 P4.5 retina GGCTGAGCCA (2) 5.9 0.0059 P4.5 retina GCTGTGTGGG (5) 2 0.002 P6.5 retina AGTTATGGTA (3) 3.3 0.0033 P6.5 retina GCTGTGTGGG (5) 1.7 0.0017 P10.5 crx- retina GCTGTGTGGG (5) 1.9 0.0019 P10.5 crx- retina GGCTGAGCCA (2) 1.9 0.0019 P10.5 crx+ retina AGTTATGGTA (3) 7.7 0.0077 P10.5 crx+ retina GCCCTGGCAG (10) 3.8 0.0038 Adult retinal AGTTATGGTA (3) 9.3 0.0093 Adult retinal GCCCTGGCAG (10) 1.9 0.0019 Adult retinal GCTGTGTGGG (5) 1.9 0.0019 Adult retinal GGCTGAGCCA (2) 1.9 0.0019 Adult retinal TCCTTGGCAG (6) 1.9 0.0019 ONL AGTTATGGTA (3) 19.2 0.0192