Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273756	Smarcd1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	15	15 F1 (15 56.8 cM)	83797
Gene Ontology	chromatin modification | nucleus
Human Homolog	SMARCD1[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACCAAAATT 9.8 0.0098 P8 Cb GC AAAACAAAAC (12) 1.6 0.0016 Cb medulloblastoma GACCAAAATT 4.6 0.0046 Cb medulloblastoma GAGCCAGCTC (4) 2.3 0.0023 Cb medulloblastoma GGACCTCCTG (4) 2.3 0.0023 Cb medulloblastoma TGGCATATAT (5) 2.3 0.0023 Cb medulloblastoma TGGCCATTGC (6) 2.3 0.0023 P8 GC+1d culture GACCAAAATT 6.8 0.0068 P8 GC+1d culture GAGCCAGCTC (4) 2.3 0.0023 P8 GC+1d culture TGGCATATAT (5) 1.1 0.0011 P8 GC+SHH+1d culture GACCAAAATT 10.5 0.0105 P8 GC+SHH+1d culture TCCTATATCC 1.2 0.0012 P8 GC+SHH+1d culture TGGCATATAT (5) 1.2 0.0012 3T3 fibroblasts GGACCTCCTG (4) 3.5 0.0035 E15 cortex CCGGGCAGTG (6) 4.9 0.0049 E15 cortex GACCAAAATT 4.9 0.0049 E15 cortex GGACCTCCTG (4) 4.9 0.0049 Hypothalamus GACCAAAATT 5.4 0.0054 Hypothalamus GGACCTCCTG (4) 1.8 0.0018 E12.5 retina CCGGGCAGTG (6) 3.8 0.0038 E12.5 retina GACCAAAATT 1.9 0.0019 E12.5 retina TGGCCATTGC (6) 1.9 0.0019 E14.5 retina GACCAAAATT 9.1 0.0091 E16.5 retina GACCAAAATT 9.1 0.0091 E16.5 retina TCCTATATCC 1.8 0.0018 E18.5 retina GACCAAAATT 12.7 0.0127 E18.5 retina TGGCATATAT (5) 1.8 0.0018 P0.5 retina GACCAAAATT 5.9 0.0059 P0.5 retina AAAACAAAAC (12) 2 0.002 P0.5 retina GAGCCAGCTC (4) 2 0.002 P2.5 retina GACCAAAATT 8.8 0.0088 P4.5 retina GACCAAAATT 13.9 0.0139 P6.5 retina GACCAAAATT 3.3 0.0033 P6.5 retina AAAACAAAAC (12) 1.7 0.0017 P6.5 retina TCCTATATCC 1.7 0.0017 P10.5 crx- retina GACCAAAATT 5.6 0.0056 P10.5 crx- retina AAAACAAAAC (12) 1.9 0.0019 P10.5 crx- retina GAGCCAGCTC (4) 1.9 0.0019 P10.5 crx- retina TCCTATATCC 1.9 0.0019 P10.5 crx+ retina GACCAAAATT 1.9 0.0019 P10.5 crx+ retina TGGCCATTGC (6) 1.9 0.0019 Adult retinal GACCAAAATT 5.6 0.0056