Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274146	Pcbp1	poly(rC) binding protein 1	6		23983
Gene Ontology	DNA binding | mRNA processing | nucleic acid binding | nucleus | ribonucleoprotein complex | RNA binding | translation activator activity
Human Homolog	PCBP1[poly(rC) binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATTTTATTT (5) 16.3 0.0163 P8 Cb GC AACCAAAAAA (3) 9.8 0.0098 P8 Cb GC AGCCAAAAAA (9) 6.5 0.0065 Cb medulloblastoma AGCCAAAAAA (9) 32.4 0.0324 Cb medulloblastoma GATTTTATTT (5) 13.9 0.0139 Cb medulloblastoma AACTCACCAT (2) 2.3 0.0023 Cb medulloblastoma ATCCAACTGT 2.3 0.0023 Cb medulloblastoma CCGGCCAGCT (2) 2.3 0.0023 P8 GC+1d culture GATTTTATTT (5) 14.8 0.0148 P8 GC+1d culture AACCAAAAAA (3) 6.8 0.0068 P8 GC+1d culture AGCCAAAAAA (9) 6.8 0.0068 P8 GC+1d culture GATTTCATTT (3) 2.3 0.0023 P8 GC+1d culture ATCCAACTGT 1.1 0.0011 P8 GC+1d culture GGAATTTTTT (7) 1.1 0.0011 P8 GC+SHH+1d culture GATTTTATTT (5) 28.1 0.0281 P8 GC+SHH+1d culture AGCCAAAAAA (9) 18.7 0.0187 P8 GC+SHH+1d culture AACCAAAAAA (3) 9.4 0.0094 P8 GC+SHH+1d culture GGAATTTTTT (7) 2.3 0.0023 P8 GC+SHH+1d culture GGATTTTATT (4) 2.3 0.0023 E15 cortex GATTTTATTT (5) 9.9 0.0099 E15 cortex AGCCAAAAAA (9) 4.9 0.0049 E15 cortex ATCCAACTGT 4.9 0.0049 E15 cortex GAGATTTTAT 4.9 0.0049 P1 cortex GATTTTATTT (5) 9.1 0.0091 P1 cortex AACCAAAAAA (3) 4.5 0.0045 P1 cortex CCGGCCAGCT (2) 4.5 0.0045 P1 cortex GATTTTTTTT (15) 4.5 0.0045 Hypothalamus GATTTTATTT (5) 10.9 0.0109 Hypothalamus AACCAAAAAA (3) 5.4 0.0054 Hypothalamus ATCCAACTGT 1.8 0.0018 E12.5 retina GATTTTATTT (5) 7.5 0.0075 E12.5 retina AACCAAAAAA (3) 3.8 0.0038 E12.5 retina AGCCAAAAAA (9) 3.8 0.0038 E14.5 retina AACCAAAAAA (3) 12.8 0.0128 E14.5 retina GATTTTATTT (5) 12.8 0.0128 E14.5 retina AGCCAAAAAA (9) 5.5 0.0055 E14.5 retina AACTCACCAT (2) 1.8 0.0018 E14.5 retina ATCCAACTGT 1.8 0.0018 E14.5 retina GAGATTTTAT 1.8 0.0018 E14.5 retina GGATTTTATT (4) 1.8 0.0018 E16.5 retina AACCAAAAAA (3) 9.1 0.0091 E16.5 retina AGCCAAAAAA (9) 3.6 0.0036 E16.5 retina GATTTTATTT (5) 3.6 0.0036 E16.5 retina AACTCACCAT (2) 1.8 0.0018 E16.5 retina CCGGCCAGCT (2) 1.8 0.0018 E16.5 retina GGATTTTATT (4) 1.8 0.0018 E18.5 retina GATTTTATTT (5) 20 0.02 E18.5 retina AACCAAAAAA (3) 16.4 0.0164 E18.5 retina AGCCAAAAAA (9) 14.6 0.0146 E18.5 retina GAGATTTTAT 1.8 0.0018 P0.5 retina AACCAAAAAA (3) 7.9 0.0079 P0.5 retina GATTTTATTT (5) 5.9 0.0059 P0.5 retina AGCCAAAAAA (9) 3.9 0.0039 P2.5 retina GATTTTATTT (5) 12.3 0.0123 P2.5 retina AACCAAAAAA (3) 5.3 0.0053 P2.5 retina GGATTTTATT (4) 3.5 0.0035 P2.5 retina AGCCAAAAAA (9) 1.8 0.0018 P2.5 retina ATCCAACTGT 1.8 0.0018 P4.5 retina GATTTTATTT (5) 13.9 0.0139 P4.5 retina AACCAAAAAA (3) 7.9 0.0079 P6.5 retina AGCCAAAAAA (9) 10 0.01 P6.5 retina AACCAAAAAA (3) 5 0.005 P6.5 retina GATTTTATTT (5) 5 0.005 P6.5 retina GGATTTTATT (4) 1.7 0.0017 P10.5 crx- retina GATTTTATTT (5) 18.6 0.0186 P10.5 crx- retina AACCAAAAAA (3) 3.7 0.0037 P10.5 crx- retina AGCCAAAAAA (9) 3.7 0.0037 P10.5 crx- retina ATCCAACTGT 3.7 0.0037 P10.5 crx+ retina GATTTTATTT (5) 5.8 0.0058 P10.5 crx+ retina AGCCAAAAAA (9) 3.8 0.0038 P10.5 crx+ retina GATTTTTTTT (15) 1.9 0.0019 P10.5 crx+ retina GGATTTTATT (4) 1.9 0.0019 Adult retinal AGCCAAAAAA (9) 5.6 0.0056 Adult retinal AACCAAAAAA (3) 3.7 0.0037 Adult retinal ATCCAACTGT 3.7 0.0037 Adult retinal GATTTTATTT (5) 3.7 0.0037 Adult retinal GATTTCATTT (3) 1.9 0.0019 ONL GATTTTATTT (5) 9.6 0.0096 ONL AACCAAAAAA (3) 3.8 0.0038 ONL GGATTTTATT (4) 3.8 0.0038 ONL AGCCAAAAAA (9) 1.9 0.0019 ONL ATCCAACTGT 1.9 0.0019