Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274237	Irf2bp1	interferon regulatory factor 2 binding protein 1	7		272359
Gene Ontology	negative regulation of transcription from Pol II promoter | nucleus | transcription corepressor activity | transcription factor binding
Human Homolog	IRF2BP1[interferon regulatory factor 2 binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTTTTTT (36) 1.6 0.0016 P8 Cb GC CAGGGCGAGA 1.6 0.0016 P8 Cb GC GCCCGGGAAC (5) 1.6 0.0016 Cb medulloblastoma GCCCGGGAAC (5) 2.3 0.0023 P8 GC+1d culture CAGGGCGAGA 3.4 0.0034 P8 GC+1d culture GCCCGGGAAC (5) 2.3 0.0023 P8 GC+1d culture ATTTTTTTTT (36) 1.1 0.0011 P8 GC+SHH+1d culture ATTTTTTTTT (36) 3.5 0.0035 P8 GC+SHH+1d culture CAGGGCGAGA 2.3 0.0023 P8 GC+SHH+1d culture GCCCGGGAAC (5) 1.2 0.0012 3T3 fibroblasts CAGGGCGAGA 3.5 0.0035 E15 cortex CAGGGCGAGA 4.9 0.0049 E15 cortex GCCCGGGAAC (5) 4.9 0.0049 P1 cortex ATTTTTTTTT (36) 4.5 0.0045 E14.5 retina ATTTTTTTTT (36) 1.8 0.0018 E16.5 retina CAGGGCGAGA 1.8 0.0018 E16.5 retina GCCCGGGAAC (5) 1.8 0.0018 E18.5 retina CAGGGCGAGA 3.6 0.0036 E18.5 retina ATTTTTTTTT (36) 1.8 0.0018 P0.5 retina CAGGGCGAGA 5.9 0.0059 P0.5 retina ATTTTTTTTT (36) 3.9 0.0039 P2.5 retina ATTTTTTTTT (36) 3.5 0.0035 P2.5 retina CGGGTGACTT 1.8 0.0018 P2.5 retina GCCCGGGAAC (5) 1.8 0.0018 P4.5 retina GCCCGGGAAC (5) 5.9 0.0059 P4.5 retina ATTTTTTTTT (36) 4 0.004 P4.5 retina CAGGGCGAGA 4 0.004 P6.5 retina CAGGGCGAGA 1.7 0.0017 P10.5 crx- retina CAGGGCGAGA 1.9 0.0019 P10.5 crx+ retina CGGGTGACTT 3.8 0.0038 Adult retinal CAGGGCGAGA 5.6 0.0056 Adult retinal CGGGTGACTT 1.9 0.0019 ONL CAGGGCGAGA 1.9 0.0019