Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27431	Traf3	Tnf receptor-associated factor 3	12	12 55.0 cM	22031
Gene Ontology	apoptosis | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	TRAF3[TNF receptor-associated factor 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TAAGGTTTCA (2) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TAAGGTTTCA (2) 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 P1 cortex TAAAAAAAAA (196) 50 0.05 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TAAGGTTTCA (2) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina AAGCCCACAC (2) 1.8 0.0018 E14.5 retina GACCAAGGAG (5) 1.8 0.0018 E14.5 retina TAAGGTTTCA (2) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina AAGCCCACAC (2) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GACCAAGGAG (5) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GACCAAGGAG (5) 3.5 0.0035 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GACCAAGGAG (5) 4 0.004 P4.5 retina TAAGGTTTCA (2) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GACCAAGGAG (5) 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TAAGGTTTCA (2) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal AAGCCCACAC (2) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287