Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.274404
Akap10
A kinase (PRKA) anchor protein 10
11
56697
Mm.274404
B130049N18Rik
RIKEN cDNA B130049N18 gene
11
319787
Mm.274404
A430106A12Rik
RIKEN cDNA A430106A12 gene
11
68164
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGATCATTCT (
6
)
8.2
0.0082
P8 Cb GC
GCTTCTGTAA (
8
)
1.6
0.0016
P8 Cb GC
TACTTAAACC
(
3
)
1.6
0.0016
Cb medulloblastoma
GGATCATTCT (
6
)
4.6
0.0046
Cb medulloblastoma
GGTGCTGGGA (
14
)
2.3
0.0023
Cb medulloblastoma
TACTTAAACC
(
3
)
2.3
0.0023
P8 GC+1d culture
TACATATATA (
12
)
2.3
0.0023
P8 GC+1d culture
GCTTCTGTAA (
8
)
1.1
0.0011
P8 GC+SHH+1d culture
GGATCATTCT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTTCTGTAA (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
TACATATATA (
12
)
1.2
0.0012
3T3 fibroblasts
GCTTCTGTAA (
8
)
3.5
0.0035
3T3 fibroblasts
GGATCATTCT (
6
)
3.5
0.0035
3T3 fibroblasts
TGTGTATACA (
8
)
3.5
0.0035
E15 cortex
GGTGCTGGGA (
14
)
4.9
0.0049
P1 cortex
GGATCATTCT (
6
)
9.1
0.0091
P1 cortex
TACATATATA (
12
)
9.1
0.0091
Hypothalamus
GGTGCTGGGA (
14
)
3.6
0.0036
Hypothalamus
GGATCATTCT (
6
)
1.8
0.0018
Hypothalamus
TACTTAAACC
(
3
)
1.8
0.0018
E12.5 retina
GGATCATTCT (
6
)
3.8
0.0038
E12.5 retina
GGTGCTGGGA (
14
)
1.9
0.0019
E12.5 retina
TACTTAAACC
(
3
)
1.9
0.0019
E14.5 retina
GGATCATTCT (
6
)
3.6
0.0036
E14.5 retina
GGTGCTGGGA (
14
)
1.8
0.0018
E16.5 retina
ATCAACCACT
(
5
)
1.8
0.0018
E16.5 retina
TACATATATA (
12
)
1.8
0.0018
E18.5 retina
TACTTAAACC
(
3
)
3.6
0.0036
E18.5 retina
TGTGTATACA (
8
)
3.6
0.0036
E18.5 retina
GGATCATTCT (
6
)
1.8
0.0018
P0.5 retina
GGTGCTGGGA (
14
)
3.9
0.0039
P0.5 retina
ATCAACCACT
(
5
)
2
0.002
P2.5 retina
GCTTCTGTAA (
8
)
1.8
0.0018
P2.5 retina
GGTGCTGGGA (
14
)
1.8
0.0018
P2.5 retina
TACTTAAACC
(
3
)
1.8
0.0018
P6.5 retina
GGATCATTCT (
6
)
3.3
0.0033
P6.5 retina
GGTGCTGGGA (
14
)
3.3
0.0033
P6.5 retina
TACTTAAACC
(
3
)
1.7
0.0017
P10.5 crx+ retina
ATCAACCACT
(
5
)
1.9
0.0019
P10.5 crx+ retina
GGTGCTGGGA (
14
)
1.9
0.0019
Adult retinal
GGTGCTGGGA (
14
)
5.6
0.0056
Adult retinal
TGTGTATACA (
8
)
1.9
0.0019
ONL
GGTGCTGGGA (
14
)
5.7
0.0057
ONL
TACTTAAACC
(
3
)
3.8
0.0038
ONL
GCTTCTGTAA (
8
)
1.9
0.0019
