Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.274433
BC003965
cDNA sequence BC003965
17
214489
Mm.274433
4930568E02Rik
RIKEN cDNA 4930568E02 gene
17
75872
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTCTTTTGAG
(
2
)
3.3
0.0033
P8 Cb GC
ATTAGGCTGT
(
2
)
1.6
0.0016
P8 Cb GC
CAGCTGGCTT
(
2
)
1.6
0.0016
Cb medulloblastoma
CAGGTGGGTT
(
5
)
2.3
0.0023
P8 GC+1d culture
TTTCCAGCGT
(
6
)
3.4
0.0034
P8 GC+1d culture
ATTAGGCTGT
(
2
)
1.1
0.0011
P8 GC+1d culture
CAGGTGGGTT
(
5
)
1.1
0.0011
P8 GC+1d culture
GCTCCGGGTT
(
2
)
1.1
0.0011
P8 GC+1d culture
TAGGTTCTGG (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTCCAGCGT
(
6
)
3.5
0.0035
P8 GC+SHH+1d culture
CAGCTGGCTT
(
2
)
1.2
0.0012
3T3 fibroblasts
CAGGTGGGTT
(
5
)
3.5
0.0035
E15 cortex
AGAACTTAAA
(
8
)
4.9
0.0049
P1 cortex
CAGGTGGGTT
(
5
)
4.5
0.0045
Hypothalamus
CAGCTGGCTT
(
2
)
1.8
0.0018
Hypothalamus
TTCTTTTGAG
(
2
)
1.8
0.0018
Hypothalamus
TTTCCAGCGT
(
6
)
1.8
0.0018
E12.5 retina
TTTCCAGCGT
(
6
)
3.8
0.0038
E12.5 retina
CAGCTGGCTT
(
2
)
1.9
0.0019
E14.5 retina
CAGGTGGGTT
(
5
)
3.6
0.0036
E14.5 retina
AGAACTTAAA
(
8
)
1.8
0.0018
E14.5 retina
TTTCCAGCGT
(
6
)
1.8
0.0018
E16.5 retina
AGAACTTAAA
(
8
)
3.6
0.0036
E16.5 retina
TTTCCAGCGT
(
6
)
1.8
0.0018
E18.5 retina
CAGGTGGGTT
(
5
)
3.6
0.0036
E18.5 retina
CAGCTGGCTT
(
2
)
1.8
0.0018
E18.5 retina
TAGGTTCTGG (
5
)
1.8
0.0018
E18.5 retina
TTTCCAGCGT
(
6
)
1.8
0.0018
P0.5 retina
ATTAGGCTGT
(
2
)
2
0.002
P0.5 retina
TTTCCAGCGT
(
6
)
2
0.002
P2.5 retina
CAGGTGGGTT
(
5
)
5.3
0.0053
P2.5 retina
ATTAGGCTGT
(
2
)
1.8
0.0018
P4.5 retina
CAGGTGGGTT
(
5
)
2
0.002
P4.5 retina
TAGGTTCTGG (
5
)
2
0.002
P4.5 retina
TTCTTTTGAG
(
2
)
2
0.002
P6.5 retina
CAGGTGGGTT
(
5
)
6.7
0.0067
P6.5 retina
GCTCCGGGTT
(
2
)
1.7
0.0017
P10.5 crx- retina
TTTCCAGCGT
(
6
)
5.6
0.0056
P10.5 crx- retina
ATTAGGCTGT
(
2
)
1.9
0.0019
P10.5 crx- retina
CAGCTGGCTT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GCTCCGGGTT
(
2
)
3.8
0.0038
P10.5 crx+ retina
TAGGTTCTGG (
5
)
1.9
0.0019
Adult retinal
TTTCCAGCGT
(
6
)
3.7
0.0037
Adult retinal
GCTCCGGGTT
(
2
)
1.9
0.0019
Adult retinal
TAGGTTCTGG (
5
)
1.9
0.0019
Adult retinal
TTCTTTTGAG
(
2
)
1.9
0.0019
ONL
CAGCTGGCTT
(
2
)
1.9
0.0019
ONL
TTTCCAGCGT
(
6
)
1.9
0.0019
