Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.274542
Rnf5
ring finger protein 5
17
17 18.75 cM
54197
Gene Ontology
integral to membrane
Human Homolog
RNF5[ring finger protein 5]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCGAGGAGTG
(
4
)
3.3
0.0033
P8 Cb GC
GAAGTAAGGG
(
3
)
1.6
0.0016
Cb medulloblastoma
ACCCCATCTC (
3
)
2.3
0.0023
Cb medulloblastoma
GAAGTAAGGG
(
3
)
2.3
0.0023
P8 GC+1d culture
GCGAGGAGTG
(
4
)
9.1
0.0091
P8 GC+1d culture
GAAGTAAGGG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCGAGGAGTG
(
4
)
9.4
0.0094
3T3 fibroblasts
GCGAGGAGTG
(
4
)
17.5
0.0175
E15 cortex
GCGAGGAGTG
(
4
)
14.8
0.0148
P1 cortex
GCGAGGAGTG
(
4
)
13.6
0.0136
Hypothalamus
GCGAGGAGTG
(
4
)
5.4
0.0054
Hypothalamus
GCAAGGAGTG (
3
)
1.8
0.0018
Hypothalamus
GCAGCAGCGG
(
4
)
1.8
0.0018
E12.5 retina
GCGAGGAGTG
(
4
)
3.8
0.0038
E12.5 retina
GAAGTAAGGG
(
3
)
1.9
0.0019
E14.5 retina
ACCCCATCTC (
3
)
1.8
0.0018
E14.5 retina
GCGAGGAGTG
(
4
)
1.8
0.0018
E16.5 retina
GCGAGGAGTG
(
4
)
3.6
0.0036
E16.5 retina
ACCCCATCTC (
3
)
1.8
0.0018
E16.5 retina
GCAAGGAGTG (
3
)
1.8
0.0018
E18.5 retina
ACCCCATCTC (
3
)
3.6
0.0036
E18.5 retina
GCGAGGAGTG
(
4
)
3.6
0.0036
E18.5 retina
GAAGTAAGGG
(
3
)
1.8
0.0018
E18.5 retina
GCAAGGAGTG (
3
)
1.8
0.0018
P0.5 retina
GCGAGGAGTG
(
4
)
9.8
0.0098
P0.5 retina
GCAGCAGCGG
(
4
)
7.9
0.0079
P2.5 retina
GCGAGGAGTG
(
4
)
10.6
0.0106
P2.5 retina
ACCCCATCTC (
3
)
5.3
0.0053
P2.5 retina
GAAGTAAGGG
(
3
)
1.8
0.0018
P2.5 retina
GCAAGGAGTG (
3
)
1.8
0.0018
P4.5 retina
GCGAGGAGTG
(
4
)
9.9
0.0099
P4.5 retina
GCAGCAGCGG
(
4
)
2
0.002
P6.5 retina
GCGAGGAGTG
(
4
)
16.7
0.0167
P6.5 retina
GAAGTAAGGG
(
3
)
5
0.005
P6.5 retina
ACCCCATCTC (
3
)
3.3
0.0033
P10.5 crx- retina
GCGAGGAGTG
(
4
)
5.6
0.0056
P10.5 crx- retina
GCAAGGAGTG (
3
)
1.9
0.0019
P10.5 crx+ retina
GAAGTAAGGG
(
3
)
3.8
0.0038
P10.5 crx+ retina
ACCATCTCTG
1.9
0.0019
P10.5 crx+ retina
GCAAGGAGTG (
3
)
1.9
0.0019
P10.5 crx+ retina
GCGAGGAGTG
(
4
)
1.9
0.0019
Adult retinal
GCGAGGAGTG
(
4
)
18.5
0.0185
Adult retinal
ACCCCATCTC (
3
)
3.7
0.0037
Adult retinal
GAAGTAAGGG
(
3
)
3.7
0.0037
ONL
GCGAGGAGTG
(
4
)
3.8
0.0038
ONL
ACCATCTCTG
1.9
0.0019
ONL
ACCCCATCTC (
3
)
1.9
0.0019
ONL
GAAGTAAGGG
(
3
)
1.9
0.0019
ONL
GCAAGGAGTG (
3
)
1.9
0.0019
