Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.274579
1110046J11Rik
RIKEN cDNA 1110046J11 gene
16
68812
Mm.274579
4930429H24Rik
RIKEN cDNA 4930429H24 gene
16
75785
Gene Ontology
ion channel activity
Human Homolog
DRE1[DRE1 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 70 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCAGTTCACA (
4
)
4.9
0.0049
P8 Cb GC
TCCTTGTTCT
(
2
)
4.9
0.0049
P8 Cb GC
TCCATTCATA
(
3
)
1.6
0.0016
P8 Cb GC
TGGGTGCTGA (
5
)
1.6
0.0016
P8 Cb GC
TTTATTGCAG
(
5
)
1.6
0.0016
Cb medulloblastoma
GCAGTTCACA (
4
)
11.6
0.0116
Cb medulloblastoma
TCCATTCATA
(
3
)
2.3
0.0023
Cb medulloblastoma
TTTATTGCAG
(
5
)
2.3
0.0023
P8 GC+1d culture
GCAGTTCACA (
4
)
8
0.008
P8 GC+1d culture
TGTGTGGTTG (
3
)
4.6
0.0046
P8 GC+1d culture
TCCATTCATA
(
3
)
3.4
0.0034
P8 GC+1d culture
TCCTTGTTCT
(
2
)
2.3
0.0023
P8 GC+1d culture
TGGGTGCTGA (
5
)
2.3
0.0023
P8 GC+1d culture
TGTGCCTGTA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TCCTTGTTCT
(
2
)
7
0.007
P8 GC+SHH+1d culture
GCAGTTCACA (
4
)
4.7
0.0047
P8 GC+SHH+1d culture
TGGGTGCTGA (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
GAGAACACTC
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TCCATTCATA
(
3
)
2.3
0.0023
3T3 fibroblasts
TGGGTGCTGA (
5
)
3.5
0.0035
3T3 fibroblasts
TGTGCCTGTA
(
2
)
3.5
0.0035
E15 cortex
TGGGTGCTGA (
5
)
24.7
0.0247
E15 cortex
GCAGTTCACA (
4
)
14.8
0.0148
E15 cortex
TCCTTGTTCT
(
2
)
9.9
0.0099
P1 cortex
GCAGTTCACA (
4
)
4.5
0.0045
P1 cortex
TTTATTGCAG
(
5
)
4.5
0.0045
Hypothalamus
ATGGTGGAAA (
8
)
5.4
0.0054
Hypothalamus
GCAGTTCACA (
4
)
5.4
0.0054
Hypothalamus
TCCATTCATA
(
3
)
3.6
0.0036
Hypothalamus
GAGAACACTC
(
6
)
1.8
0.0018
Hypothalamus
TGGGTGCTGA (
5
)
1.8
0.0018
E12.5 retina
GCAGTTCACA (
4
)
3.8
0.0038
E12.5 retina
TGGGTGCTGA (
5
)
3.8
0.0038
E12.5 retina
TCCTTGTTCT
(
2
)
1.9
0.0019
E14.5 retina
TCCATTCATA
(
3
)
7.3
0.0073
E14.5 retina
GCAGTTCACA (
4
)
5.5
0.0055
E14.5 retina
GAGAACACTC
(
6
)
1.8
0.0018
E14.5 retina
TGGGTGCTGA (
5
)
1.8
0.0018
E16.5 retina
TCCTTGTTCT
(
2
)
7.2
0.0072
E16.5 retina
GCAGTTCACA (
4
)
5.4
0.0054
E16.5 retina
TGGGTGCTGA (
5
)
5.4
0.0054
E16.5 retina
TCCATTCATA
(
3
)
3.6
0.0036
E18.5 retina
TGGGTGCTGA (
5
)
7.3
0.0073
E18.5 retina
GCAGTTCACA (
4
)
5.5
0.0055
E18.5 retina
TCCATTCATA
(
3
)
1.8
0.0018
E18.5 retina
TGTGCCTGTA
(
2
)
1.8
0.0018
P0.5 retina
GCAGTTCACA (
4
)
7.9
0.0079
P0.5 retina
TCCATTCATA
(
3
)
7.9
0.0079
P0.5 retina
TGGGTGCTGA (
5
)
5.9
0.0059
P2.5 retina
TCCTTGTTCT
(
2
)
8.8
0.0088
P2.5 retina
TGGGTGCTGA (
5
)
1.8
0.0018
P4.5 retina
GCAGTTCACA (
4
)
9.9
0.0099
P4.5 retina
TCCTTGTTCT
(
2
)
4
0.004
P4.5 retina
TGGGTGCTGA (
5
)
4
0.004
P6.5 retina
GCAGTTCACA (
4
)
6.7
0.0067
P6.5 retina
TCCATTCATA
(
3
)
5
0.005
P6.5 retina
TGGGTGCTGA (
5
)
5
0.005
P6.5 retina
TCCTTGTTCT
(
2
)
1.7
0.0017
P10.5 crx- retina
TCCTTGTTCT
(
2
)
35.3
0.0353
P10.5 crx- retina
TGGGTGCTGA (
5
)
1.9
0.0019
P10.5 crx+ retina
TCCTTGTTCT
(
2
)
11.5
0.0115
P10.5 crx+ retina
TGGGTGCTGA (
5
)
9.6
0.0096
P10.5 crx+ retina
GCAGTTCACA (
4
)
3.8
0.0038
Adult retinal
TGGGTGCTGA (
5
)
3.7
0.0037
Adult retinal
TCCATTCATA
(
3
)
1.9
0.0019
Adult retinal
TCCTTGTTCT
(
2
)
1.9
0.0019
ONL
GCAGTTCACA (
4
)
5.7
0.0057
ONL
TCCATTCATA
(
3
)
3.8
0.0038
ONL
TTTATTGCAG
(
5
)
3.8
0.0038
ONL
TGGGTGCTGA (
5
)
1.9
0.0019
