Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.274646
Centb2
centaurin, beta 2
16
78618
Mm.274646
2810455B08Rik
RIKEN cDNA 2810455B08 gene
16
72777
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCACACAGA (
6
)
6.5
0.0065
P8 Cb GC
TGCATATTTG (
2
)
3.3
0.0033
P8 Cb GC
ATGTACATTT
(
2
)
1.6
0.0016
P8 Cb GC
TTGAAATGTA
(
4
)
1.6
0.0016
Cb medulloblastoma
TGACAAAGAA (
5
)
4.6
0.0046
Cb medulloblastoma
TGCACACAGA (
6
)
2.3
0.0023
Cb medulloblastoma
TGCATATTTG (
2
)
2.3
0.0023
Cb medulloblastoma
TGGATATAGG
(
2
)
2.3
0.0023
P8 GC+1d culture
TGCACACAGA (
6
)
4.6
0.0046
P8 GC+1d culture
TGCACAAAGA (
6
)
2.3
0.0023
P8 GC+1d culture
TTTAAGATTT
(
4
)
2.3
0.0023
P8 GC+1d culture
TGGACAAAGA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGCACAAAGA (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCATATTTG (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGACAAAGA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGATATAGG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTATGCATA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTAAGATTT
(
4
)
1.2
0.0012
3T3 fibroblasts
TGCACACAGA (
6
)
7
0.007
3T3 fibroblasts
TGGACAAAGA
(
3
)
3.5
0.0035
E15 cortex
TGCACACAGA (
6
)
4.9
0.0049
P1 cortex
TGCACACAGA (
6
)
9.1
0.0091
P1 cortex
TGCACAAAGA (
6
)
4.5
0.0045
Hypothalamus
TGCACAAAGA (
6
)
7.2
0.0072
Hypothalamus
TGCACACAGA (
6
)
3.6
0.0036
Hypothalamus
TGGATATAGG
(
2
)
1.8
0.0018
Hypothalamus
TTTAAGATTT
(
4
)
1.8
0.0018
E12.5 retina
TGCACACAGA (
6
)
11.3
0.0113
E14.5 retina
TGCACAAAGA (
6
)
3.6
0.0036
E14.5 retina
TGCACACAGA (
6
)
3.6
0.0036
E14.5 retina
ATGTACATTT
(
2
)
1.8
0.0018
E14.5 retina
TGTATGCATA
(
4
)
1.8
0.0018
E16.5 retina
TGCACACAGA (
6
)
5.4
0.0054
E16.5 retina
TGCACAAAGA (
6
)
1.8
0.0018
E16.5 retina
TGCATATTTG (
2
)
1.8
0.0018
E16.5 retina
TTGAAATGTA
(
4
)
1.8
0.0018
E18.5 retina
TGCACAAAGA (
6
)
1.8
0.0018
E18.5 retina
TTGAAATGTA
(
4
)
1.8
0.0018
E18.5 retina
TTTAAGATTT
(
4
)
1.8
0.0018
P0.5 retina
TGCACACAGA (
6
)
7.9
0.0079
P0.5 retina
TTGAAATGTA
(
4
)
2
0.002
P2.5 retina
TGCACACAGA (
6
)
7
0.007
P2.5 retina
TGCACAAAGA (
6
)
1.8
0.0018
P4.5 retina
TGCACAAAGA (
6
)
4
0.004
P4.5 retina
ATGTACATTT
(
2
)
2
0.002
P4.5 retina
TGGATATAGG
(
2
)
2
0.002
P4.5 retina
TTTAAGATTT
(
4
)
2
0.002
P6.5 retina
TGACAAAGAA (
5
)
1.7
0.0017
P10.5 crx- retina
TGCACACAGA (
6
)
11.1
0.0111
P10.5 crx- retina
ATGTACATTT
(
2
)
1.9
0.0019
P10.5 crx- retina
TTGAAATGTA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGCACACAGA (
6
)
9.6
0.0096
P10.5 crx+ retina
TGCATATTTG (
2
)
1.9
0.0019
P10.5 crx+ retina
TTGAAATGTA
(
4
)
1.9
0.0019
Adult retinal
TGCACACAGA (
6
)
13
0.013
Adult retinal
TGGACAAAGA
(
3
)
3.7
0.0037
ONL
TGCACACAGA (
6
)
3.8
0.0038
ONL
TGACAAAGAA (
5
)
1.9
0.0019
ONL
TGGACAAAGA
(
3
)
1.9
0.0019
ONL
TGTATGCATA
(
4
)
1.9
0.0019
