Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.274770 Xistinactive X specific transcripts X  X 42.0 cM  213742 
 Gene Ontology chromosome | dosage compensation, by inactivation of X chromosome
 Clusters 
   Neighbors    

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 100 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTCACAATGAG (2)9.80.0098
P8 Cb GCGAAAACACCT (5)4.90.0049
P8 Cb GCGAAAAAGGAA (9)3.30.0033
P8 Cb GCTGGTTGTTGG (20)3.30.0033
P8 Cb GCAGGAAATGAA (9)1.60.0016
P8 Cb GCGGGGCTCACA (10)1.60.0016
Cb medulloblastomaCACAACAAAA (7)11.60.0116
P8 GC+1d cultureAGGAAATGAA (9)2.30.0023
P8 GC+1d cultureGGGGCTCACA (10)2.30.0023
P8 GC+1d cultureTGGTTGTTGG (20)2.30.0023
P8 GC+1d cultureCACAACAAAA (7)1.10.0011
P8 GC+1d cultureTTTCAGCACT (6)1.10.0011
P8 GC+SHH+1d cultureAGGAAATGAA (9)1.20.0012
P8 GC+SHH+1d cultureTGGTTGTTGG (20)1.20.0012
3T3 fibroblastsGAAAACACCT (5)70.007
3T3 fibroblastsCTATGTGTTG3.50.0035
3T3 fibroblastsGGTACTGGGA3.50.0035
3T3 fibroblastsTGTGAGAGGA (2)3.50.0035
E15 cortexGGGGCTCACA (10)54.40.0544
E15 cortexCCCAGCCTGA (3)9.90.0099
E15 cortexTGGTTGTTGG (20)4.90.0049
P1 cortexCTATGTGTTG18.20.0182
P1 cortexGGGGCTCACA (10)13.60.0136
P1 cortexGAAAAAGGAA (9)9.10.0091
P1 cortexTGGTTGTTGG (20)9.10.0091
P1 cortexAGGAAATGAA (9)4.50.0045
HypothalamusGGGGCTCACA (10)36.20.0362
HypothalamusTGGTTGTTGG (20)19.90.0199
HypothalamusCACAACAAAA (7)7.20.0072
HypothalamusAGGAAATGAA (9)1.80.0018
E12.5 retinaGGGGCTCACA (10)35.70.0357
E12.5 retinaTCACAATGAG (2)7.50.0075
E12.5 retinaTGGTTGTTGG (20)5.60.0056
E12.5 retinaGAAAACACCT (5)3.80.0038
E12.5 retinaGGTACTGGGA1.90.0019
E12.5 retinaTGTGAGAGGA (2)1.90.0019
E12.5 retinaTTTCAGCACT (6)1.90.0019
E14.5 retinaGGGGCTCACA (10)54.70.0547
E14.5 retinaTGGTTGTTGG (20)38.30.0383
E14.5 retinaTCACAATGAG (2)27.30.0273
E14.5 retinaGAAAACACCT (5)3.60.0036
E14.5 retinaAGGAAATGAA (9)1.80.0018
E14.5 retinaGGTACTGGGA1.80.0018
E16.5 retinaGGGGCTCACA (10)36.20.0362
E16.5 retinaTGGTTGTTGG (20)16.30.0163
E16.5 retinaAGGAAATGAA (9)1.80.0018
E16.5 retinaTTTCAGCACT (6)1.80.0018
E18.5 retinaGGGGCTCACA (10)72.80.0728
E18.5 retinaTCACAATGAG (2)7.30.0073
E18.5 retinaTGGTTGTTGG (20)5.50.0055
E18.5 retinaTGTGAGAGGA (2)1.80.0018
P0.5 retinaGGGGCTCACA (10)37.30.0373
P0.5 retinaTCACAATGAG (2)19.60.0196
P0.5 retinaCTAATGCTCA3.90.0039
P0.5 retinaAGGAAATGAA (9)20.002
P0.5 retinaCTATGTGTTG20.002
P0.5 retinaTGTGAGAGGA (2)20.002
P2.5 retinaGGGGCTCACA (10)65.10.0651
P2.5 retinaTCACAATGAG (2)65.10.0651
P2.5 retinaTGGTTGTTGG (20)70.007
P2.5 retinaCTATGTGTTG3.50.0035
P2.5 retinaAGGAAATGAA (9)1.80.0018
P2.5 retinaGAAAACACCT (5)1.80.0018
P2.5 retinaTGTGAGAGGA (2)1.80.0018
P4.5 retinaTCACAATGAG (2)35.70.0357
P4.5 retinaGGGGCTCACA (10)27.70.0277
P4.5 retinaTGGTTGTTGG (20)11.90.0119
P4.5 retinaAGGAAATGAA (9)5.90.0059
P4.5 retinaGAAAACACCT (5)5.90.0059
P4.5 retinaGGTACTGGGA40.004
P4.5 retinaCTATGTGTTG20.002
P6.5 retinaTCACAATGAG (2)56.70.0567
P6.5 retinaGGGGCTCACA (10)43.40.0434
P6.5 retinaGAAAACACCT (5)8.30.0083
P6.5 retinaCTATGTGTTG6.70.0067
P6.5 retinaTGGTTGTTGG (20)50.005
P6.5 retinaCTAATGCTCA3.30.0033
P6.5 retinaAAATAAGAAA (3)1.70.0017
P6.5 retinaCACAACAAAA (7)1.70.0017
P10.5 crx- retinaGGGGCTCACA (10)24.20.0242
P10.5 crx- retinaTCACAATGAG (2)9.30.0093
P10.5 crx- retinaTGGTTGTTGG (20)7.40.0074
P10.5 crx- retinaCTAATGCTCA3.70.0037
P10.5 crx- retinaCCCAGCCTGA (3)1.90.0019
P10.5 crx+ retinaGGGGCTCACA (10)17.30.0173
P10.5 crx+ retinaTCACAATGAG (2)9.60.0096
P10.5 crx+ retinaGAAAACACCT (5)3.80.0038
P10.5 crx+ retinaTGGTTGTTGG (20)3.80.0038
P10.5 crx+ retinaCTAATGCTCA1.90.0019
P10.5 crx+ retinaCTATGTGTTG1.90.0019
Adult retinalGGGGCTCACA (10)31.50.0315
Adult retinalTGGTTGTTGG (20)7.40.0074
Adult retinalCACAACAAAA (7)3.70.0037
Adult retinalAAATAAGAAA (3)1.90.0019
Adult retinalAGGAAATGAA (9)1.90.0019
ONLGGGGCTCACA (10)38.30.0383
ONLTGGTTGTTGG (20)11.50.0115
ONLAGGAAATGAA (9)3.80.0038
ONLGGTACTGGGA3.80.0038
ONLAAATAAGAAA (3)1.90.0019