Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274787	Pogz	pogo transposable element with ZNF domain	3		229584
Gene Ontology	development | nucleic acid binding | nucleus | zinc ion binding
Human Homolog	POGZ[pogo transposable element with ZNF domain]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGAGGAGC (3) 3.3 0.0033 P8 Cb GC TATTTATTGA (2) 3.3 0.0033 P8 Cb GC AGAACTTTGC (3) 1.6 0.0016 P8 Cb GC CAAACACCGT (6) 1.6 0.0016 P8 Cb GC GTGATAAACC (3) 1.6 0.0016 P8 Cb GC TTAACAATAG 1.6 0.0016 P8 Cb GC TTAAGTGTTG (3) 1.6 0.0016 Cb medulloblastoma GTGATAAACC (3) 4.6 0.0046 Cb medulloblastoma TATTTATTGA (2) 2.3 0.0023 Cb medulloblastoma TTAACAATAG 2.3 0.0023 Cb medulloblastoma TTAAGTGTTG (3) 2.3 0.0023 P8 GC+1d culture CAAACACCGT (6) 4.6 0.0046 P8 GC+1d culture TTAAGTGTTG (3) 3.4 0.0034 P8 GC+1d culture TTAACAATAG 2.3 0.0023 P8 GC+1d culture AGAACTTTGC (3) 1.1 0.0011 P8 GC+1d culture GGAGAAAAAT (5) 1.1 0.0011 P8 GC+1d culture GTGATAAACC (3) 1.1 0.0011 P8 GC+1d culture TATTTATTGA (2) 1.1 0.0011 P8 GC+SHH+1d culture TTAAGTGTTG (3) 9.4 0.0094 P8 GC+SHH+1d culture CAAACACCGT (6) 4.7 0.0047 P8 GC+SHH+1d culture CACAAGCGGT (2) 2.3 0.0023 P8 GC+SHH+1d culture TATTTATTGA (2) 2.3 0.0023 P8 GC+SHH+1d culture AGAACTTTGC (3) 1.2 0.0012 P8 GC+SHH+1d culture CCCGCCTGGT (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAGAAAAAT (5) 1.2 0.0012 P8 GC+SHH+1d culture GTGATAAACC (3) 1.2 0.0012 3T3 fibroblasts CAAACACCGT (6) 10.5 0.0105 3T3 fibroblasts CAGGAGGAGC (3) 3.5 0.0035 E15 cortex GGAGAAAAAT (5) 4.9 0.0049 P1 cortex GGAGAAAAAT (5) 4.5 0.0045 Hypothalamus TGGGTGATGG (7) 5.4 0.0054 Hypothalamus AGAACTTTGC (3) 3.6 0.0036 Hypothalamus GCATTGGAGA (3) 3.6 0.0036 Hypothalamus TTAACAATAG 3.6 0.0036 Hypothalamus CAGGAGGAGC (3) 1.8 0.0018 Hypothalamus TTAAGTGTTG (3) 1.8 0.0018 E12.5 retina GTGATAAACC (3) 5.6 0.0056 E12.5 retina TATTTATTGA (2) 5.6 0.0056 E12.5 retina GGAGAAAAAT (5) 1.9 0.0019 E12.5 retina TTAAGTGTTG (3) 1.9 0.0019 E14.5 retina TATTTATTGA (2) 5.5 0.0055 E14.5 retina GGAGAAAAAT (5) 3.6 0.0036 E14.5 retina TTAAGTGTTG (3) 3.6 0.0036 E14.5 retina AGAACTTTGC (3) 1.8 0.0018 E14.5 retina CACAAGCGGT (2) 1.8 0.0018 E14.5 retina CAGGAGGAGC (3) 1.8 0.0018 E16.5 retina GTGATAAACC (3) 5.4 0.0054 E16.5 retina TATTTATTGA (2) 3.6 0.0036 E16.5 retina TTAAGTGTTG (3) 3.6 0.0036 E16.5 retina AGAACTTTGC (3) 1.8 0.0018 E16.5 retina ATCTTTAAAA 1.8 0.0018 E16.5 retina GCATTGGAGA (3) 1.8 0.0018 E18.5 retina TATTTATTGA (2) 5.5 0.0055 E18.5 retina AAAACTTGCT (5) 1.8 0.0018 E18.5 retina CAGGAGGAGC (3) 1.8 0.0018 E18.5 retina TGGGTGATGG (7) 1.8 0.0018 E18.5 retina TTAACAATAG 1.8 0.0018 P0.5 retina AGAACTTTGC (3) 3.9 0.0039 P0.5 retina TTAACAATAG 3.9 0.0039 P0.5 retina GTGATAAACC (3) 2 0.002 P0.5 retina TTAAGTGTTG (3) 2 0.002 P2.5 retina AGAACTTTGC (3) 8.8 0.0088 P2.5 retina TTAAGTGTTG (3) 7 0.007 P2.5 retina CCCGCCTGGT (2) 1.8 0.0018 P2.5 retina GCATTGGAGA (3) 1.8 0.0018 P2.5 retina TATTTATTGA (2) 1.8 0.0018 P2.5 retina TGGGTGATGG (7) 1.8 0.0018 P4.5 retina TTAAGTGTTG (3) 9.9 0.0099 P4.5 retina CACAAGCGGT (2) 4 0.004 P4.5 retina GTGATAAACC (3) 4 0.004 P4.5 retina AGAACTTTGC (3) 2 0.002 P4.5 retina TATTTATTGA (2) 2 0.002 P4.5 retina TGGGTGATGG (7) 2 0.002 P6.5 retina AGAACTTTGC (3) 6.7 0.0067 P6.5 retina GTGATAAACC (3) 5 0.005 P6.5 retina AAAACTTGCT (5) 1.7 0.0017 P6.5 retina GGAGAAAAAT (5) 1.7 0.0017 P6.5 retina TATTTATTGA (2) 1.7 0.0017 P10.5 crx- retina CAAACACCGT (6) 3.7 0.0037 P10.5 crx- retina ATCTTTAAAA 1.9 0.0019 P10.5 crx- retina GTGATAAACC (3) 1.9 0.0019 P10.5 crx- retina TGGGTGATGG (7) 1.9 0.0019 P10.5 crx- retina TTAACAATAG 1.9 0.0019 P10.5 crx+ retina AGAACTTTGC (3) 1.9 0.0019 P10.5 crx+ retina TATTTATTGA (2) 1.9 0.0019 P10.5 crx+ retina TTAAGTGTTG (3) 1.9 0.0019 Adult retinal CAAACACCGT (6) 7.4 0.0074 Adult retinal AGAACTTTGC (3) 3.7 0.0037 Adult retinal CACAAGCGGT (2) 1.9 0.0019 Adult retinal TGGGTGATGG (7) 1.9 0.0019 Adult retinal TTAAGTGTTG (3) 1.9 0.0019 ONL CCCGCCTGGT (2) 3.8 0.0038 ONL TTAAGTGTTG (3) 3.8 0.0038 ONL AAAACTTGCT (5) 1.9 0.0019 ONL GTGATAAACC (3) 1.9 0.0019