Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.274811
D7Ertd156e
DNA segment, Chr 7, ERATO Doi 156, expressed
7
7 B3 (7 23.2 cM)
211548
Human Homolog
NOMO1[nodal modulator 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 15 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGAGAAAAC (
5
)
3.3
0.0033
P8 Cb GC
CTCACTCACT
3.3
0.0033
P8 Cb GC
AACAACCAGA (
5
)
1.6
0.0016
P8 Cb GC
GGAACTTTGA (
3
)
1.6
0.0016
P8 Cb GC
GGCTTCTCTG
(
7
)
1.6
0.0016
Cb medulloblastoma
GCGTTGGTCT
(
3
)
6.9
0.0069
Cb medulloblastoma
GGAACTTTGA (
3
)
2.3
0.0023
Cb medulloblastoma
TTCTTGGAAC
(
4
)
2.3
0.0023
P8 GC+1d culture
GCGTTGGTCT
(
3
)
9.1
0.0091
P8 GC+1d culture
GGAACTTTGA (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GCGTTGGTCT
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
GGAACTTTGA (
3
)
1.2
0.0012
3T3 fibroblasts
GCGTTGGTCT
(
3
)
17.5
0.0175
P1 cortex
GCGTTGGTCT
(
3
)
4.5
0.0045
Hypothalamus
GCGTTGGTCT
(
3
)
16.3
0.0163
Hypothalamus
CTCACTCACT
1.8
0.0018
Hypothalamus
TTTCCTGGAC
(
3
)
1.8
0.0018
E12.5 retina
GCGTTGGTCT
(
3
)
5.6
0.0056
E12.5 retina
GGAACTTTGA (
3
)
3.8
0.0038
E12.5 retina
TTCTTGGAAC
(
4
)
1.9
0.0019
E16.5 retina
GGAACTTTGA (
3
)
3.6
0.0036
E16.5 retina
AACAACCAGA (
5
)
1.8
0.0018
E16.5 retina
GCGTTGGTCT
(
3
)
1.8
0.0018
E18.5 retina
AACAACCAGA (
5
)
1.8
0.0018
E18.5 retina
GGAACTTTGA (
3
)
1.8
0.0018
E18.5 retina
GGCTTCTCTG
(
7
)
1.8
0.0018
E18.5 retina
TTCTTGGAAC
(
4
)
1.8
0.0018
E18.5 retina
TTTCCTGGAC
(
3
)
1.8
0.0018
P0.5 retina
GGAACTTTGA (
3
)
2
0.002
P0.5 retina
TTTCCTGGAC
(
3
)
2
0.002
P2.5 retina
GGAACTTTGA (
3
)
8.8
0.0088
P2.5 retina
GCGTTGGTCT
(
3
)
5.3
0.0053
P2.5 retina
CTCACTCACT
1.8
0.0018
P4.5 retina
GCGTTGGTCT
(
3
)
5.9
0.0059
P6.5 retina
GCGTTGGTCT
(
3
)
11.7
0.0117
P10.5 crx- retina
GCGTTGGTCT
(
3
)
1.9
0.0019
P10.5 crx- retina
TTCTTGGAAC
(
4
)
1.9
0.0019
P10.5 crx+ retina
GCGTTGGTCT
(
3
)
19.2
0.0192
P10.5 crx+ retina
AACAACCAGA (
5
)
1.9
0.0019
Adult retinal
GCGTTGGTCT
(
3
)
7.4
0.0074
Adult retinal
AAGAGAAAAC (
5
)
3.7
0.0037
Adult retinal
GGAACTTTGA (
3
)
1.9
0.0019
ONL
GCGTTGGTCT
(
3
)
15.3
0.0153
ONL
AAGAGAAAAC (
5
)
1.9
0.0019
ONL
GGAACTTTGA (
3
)
1.9
0.0019
