Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.274824
C430003P19Rik
RIKEN cDNA C430003P19 gene
7
109359
Human Homolog
KIAA0157[KIAA0157]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 81 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GAAAAAAAAA (
204
)
45.7
0.0457
P8 Cb GC
ATAAAAAAAA (
33
)
11.4
0.0114
P8 Cb GC
AAGGACATCA
(
2
)
6.5
0.0065
P8 Cb GC
GGAGGGAGGG (
4
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
GAAAAAAAAA (
204
)
173.4
0.1734
Cb medulloblastoma
ATAAAAAAAA (
33
)
25.4
0.0254
Cb medulloblastoma
AAGGACATCA
(
2
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
GAAAAAAAAA (
204
)
41.1
0.0411
P8 GC+1d culture
AAGGACATCA
(
2
)
6.8
0.0068
P8 GC+1d culture
GAGGGAGGCC
(
3
)
6.8
0.0068
P8 GC+1d culture
ATAAAAAAAA (
33
)
5.7
0.0057
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GAAAAAAAAA (
204
)
77.3
0.0773
P8 GC+SHH+1d culture
ATAAAAAAAA (
33
)
21.1
0.0211
P8 GC+SHH+1d culture
AAGGACATCA
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
GAGGGAGGCC
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GGAGGGAGGG (
4
)
2.3
0.0023
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
AAGGACATCA
(
2
)
21
0.021
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GAAAAAAAAA (
204
)
54.4
0.0544
E15 cortex
AAGGACATCA
(
2
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
GAAAAAAAAA (
204
)
45.5
0.0455
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
GAAAAAAAAA (
204
)
67
0.067
Hypothalamus
ATAAAAAAAA (
33
)
7.2
0.0072
Hypothalamus
AAGGACATCA
(
2
)
3.6
0.0036
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GAAAAAAAAA (
204
)
46.9
0.0469
E12.5 retina
ATAAAAAAAA (
33
)
11.3
0.0113
E12.5 retina
AAGGACATCA
(
2
)
3.8
0.0038
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
GAAAAAAAAA (
204
)
34.6
0.0346
E14.5 retina
ATAAAAAAAA (
33
)
16.4
0.0164
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GAAAAAAAAA (
204
)
23.5
0.0235
E16.5 retina
ATAAAAAAAA (
33
)
5.4
0.0054
E16.5 retina
AAGGACATCA
(
2
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GAAAAAAAAA (
204
)
65.5
0.0655
E18.5 retina
ATAAAAAAAA (
33
)
30.9
0.0309
E18.5 retina
AAGGACATCA
(
2
)
3.6
0.0036
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GAAAAAAAAA (
204
)
35.3
0.0353
P0.5 retina
AAGGACATCA
(
2
)
2
0.002
P0.5 retina
ATAAAAAAAA (
33
)
2
0.002
P0.5 retina
GGAGGGAGGG (
4
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GAAAAAAAAA (
204
)
86.2
0.0862
P2.5 retina
ATAAAAAAAA (
33
)
14.1
0.0141
P2.5 retina
AAGGACATCA
(
2
)
1.8
0.0018
P2.5 retina
GGAGGGAGGG (
4
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GAAAAAAAAA (
204
)
51.5
0.0515
P4.5 retina
ATAAAAAAAA (
33
)
21.8
0.0218
P4.5 retina
AAGGACATCA
(
2
)
4
0.004
P4.5 retina
GGAGGGAGGG (
4
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GAAAAAAAAA (
204
)
40
0.04
P6.5 retina
ATAAAAAAAA (
33
)
10
0.01
P6.5 retina
GGAGGGAGGG (
4
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GAAAAAAAAA (
204
)
16.7
0.0167
P10.5 crx- retina
ATAAAAAAAA (
33
)
5.6
0.0056
P10.5 crx- retina
GGAGGGAGGG (
4
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GAAAAAAAAA (
204
)
42.3
0.0423
P10.5 crx+ retina
ATAAAAAAAA (
33
)
3.8
0.0038
P10.5 crx+ retina
AAGGACATCA
(
2
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
GAAAAAAAAA (
204
)
16.7
0.0167
Adult retinal
AAGGACATCA
(
2
)
5.6
0.0056
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GAAAAAAAAA (
204
)
24.9
0.0249
ONL
AAGGACATCA
(
2
)
9.6
0.0096
ONL
GGAGGGAGGG (
4
)
3.8
0.0038
ONL
ATAAAAAAAA (
33
)
1.9
0.0019
