Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274961	5430409L15Rik	RIKEN cDNA 5430409L15 gene	11		78141
Mm.274961	4732497O03Rik	RIKEN cDNA 4732497O03 gene	11	11 47.0 cM	216987
Gene Ontology	intracellular | RNA processing
Human Homolog	HCA66[hepatocellular carcinoma-associated antigen 66]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GAAAACACCT (5) 4.9 0.0049 P8 Cb GC GAGGATGCCC (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma CAGGTGAAGG (3) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GGTGGCTCAC (9) 2.3 0.0023 P8 GC+1d culture CTCTCAAGAA (3) 1.1 0.0011 P8 GC+1d culture GAGGATGCCC (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture CAGGTGAAGG (3) 2.3 0.0023 P8 GC+SHH+1d culture CTCTCAAGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGTGGCTCAC (9) 1.2 0.0012 P8 GC+SHH+1d culture TGAGTAAAAA (3) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GAAAACACCT (5) 7 0.007 3T3 fibroblasts GAGGATGCCC (3) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GGTGGCTCAC (9) 13.6 0.0136 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GGTGGCTCAC (9) 5.4 0.0054 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina CAGGTGAAGG (3) 3.8 0.0038 E12.5 retina GAAAACACCT (5) 3.8 0.0038 E12.5 retina GGTGGCTCAC (9) 3.8 0.0038 E12.5 retina CACCAGGCTG (5) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina CAGGTGAAGG (3) 3.6 0.0036 E14.5 retina GAAAACACCT (5) 3.6 0.0036 E14.5 retina CACCAGGCTG (5) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina CTCTCAAGAA (3) 1.8 0.0018 E16.5 retina GGTGGCTCAC (9) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GGTGGCTCAC (9) 3.6 0.0036 E18.5 retina TGAGTAAAAA (3) 3.6 0.0036 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GGTGGCTCAC (9) 11.8 0.0118 P0.5 retina CAGGTGAAGG (3) 5.9 0.0059 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GGTGGCTCAC (9) 3.5 0.0035 P2.5 retina CACCAGGCTG (5) 1.8 0.0018 P2.5 retina CTCTCAAGAA (3) 1.8 0.0018 P2.5 retina GAAAACACCT (5) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GAAAACACCT (5) 5.9 0.0059 P4.5 retina GGTGGCTCAC (9) 4 0.004 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GAAAACACCT (5) 8.3 0.0083 P6.5 retina GGTGGCTCAC (9) 5 0.005 P6.5 retina GAGGATGCCC (3) 3.3 0.0033 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GGTGGCTCAC (9) 3.7 0.0037 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GGTGGCTCAC (9) 7.7 0.0077 P10.5 crx+ retina GAAAACACCT (5) 3.8 0.0038 P10.5 crx+ retina GAGGATGCCC (3) 1.9 0.0019 P10.5 crx+ retina TGAGTAAAAA (3) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GGTGGCTCAC (9) 7.4 0.0074 Adult retinal CACCAGGCTG (5) 1.9 0.0019 Adult retinal GAGGATGCCC (3) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GGTGGCTCAC (9) 5.7 0.0057