Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274995	Snurf	SNRPN upstream reading frame	7		84704
Mm.274995	Snrpn	small nuclear ribonucleoprotein N	7	7 29.0 cM	20646
Gene Ontology	nucleus | ribonucleoprotein complex | spliceosome complex | viral nucleocapsid
Human Homolog	SNURF[SNRPN upstream reading frame]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTCCTCCAG (4) 8.2 0.0082 P8 Cb GC ACTGTGGGTA (2) 1.6 0.0016 P8 Cb GC CAGAGCCCAC (5) 1.6 0.0016 P8 Cb GC GACCCCCCCC (14) 1.6 0.0016 Cb medulloblastoma CCTCCTCCAG (4) 11.6 0.0116 Cb medulloblastoma ACCCACAAGA (4) 2.3 0.0023 Cb medulloblastoma ACTGTGGGTA (2) 2.3 0.0023 Cb medulloblastoma CAGAGCCCAC (5) 2.3 0.0023 Cb medulloblastoma GACCCCCCCC (14) 2.3 0.0023 P8 GC+1d culture CCTCCTCCAG (4) 13.7 0.0137 P8 GC+1d culture CAGAGCCCAC (5) 9.1 0.0091 P8 GC+1d culture GACCCCCCCC (14) 5.7 0.0057 P8 GC+1d culture CAGAGCCACC (9) 2.3 0.0023 P8 GC+1d culture ACCCACAAGA (4) 1.1 0.0011 P8 GC+1d culture CCCCACCCAT (6) 1.1 0.0011 P8 GC+1d culture CTTTTTGTGA (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTCCTCCAG (4) 12.9 0.0129 P8 GC+SHH+1d culture GACCCCCCCC (14) 8.2 0.0082 P8 GC+SHH+1d culture CAGAGCCACC (9) 7 0.007 P8 GC+SHH+1d culture CAGAGCCCAC (5) 7 0.007 P8 GC+SHH+1d culture CTTTTTGTGA (2) 3.5 0.0035 P8 GC+SHH+1d culture ACCCACAAGA (4) 2.3 0.0023 P8 GC+SHH+1d culture CAGGCCACCA (4) 1.2 0.0012 P8 GC+SHH+1d culture CTCTGTGAAT (8) 1.2 0.0012 3T3 fibroblasts CCTCCTCCAG (4) 7 0.007 E15 cortex GACCCCCCCC (14) 34.6 0.0346 E15 cortex CCTCCTCCAG (4) 29.7 0.0297 E15 cortex CAGAGCCCAC (5) 4.9 0.0049 P1 cortex CCTCCTCCAG (4) 27.3 0.0273 P1 cortex CAGAGCCCAC (5) 9.1 0.0091 P1 cortex CAGAGCCACC (9) 4.5 0.0045 P1 cortex GACCCCCCCC (14) 4.5 0.0045 Hypothalamus CCTCCTCCAG (4) 29 0.029 Hypothalamus ACCCCACAGG (2) 3.6 0.0036 Hypothalamus CAGAGCCCAC (5) 3.6 0.0036 Hypothalamus GGTGGTCTCA (3) 3.6 0.0036 Hypothalamus ACCCACAAGA (4) 1.8 0.0018 Hypothalamus CTCTGTGAAT (8) 1.8 0.0018 Hypothalamus TACTGGGTCT (2) 1.8 0.0018 E12.5 retina CCTCCTCCAG (4) 1.9 0.0019 E14.5 retina CAGAGCCCAC (5) 9.1 0.0091 E14.5 retina CCTCCTCCAG (4) 3.6 0.0036 E14.5 retina ACTGTGGAGG (5) 1.8 0.0018 E14.5 retina CCCCACCCAT (6) 1.8 0.0018 E14.5 retina CCTCCTCCGG (4) 1.8 0.0018 E14.5 retina TACTGGGTCT (2) 1.8 0.0018 E16.5 retina CCTCCTCCAG (4) 12.7 0.0127 E16.5 retina CAGAGCCCAC (5) 10.9 0.0109 E16.5 retina CCCCACCCAT (6) 1.8 0.0018 E16.5 retina CTCTGTGAAT (8) 1.8 0.0018 E16.5 retina GGTGGTCTCA (3) 1.8 0.0018 E18.5 retina CAGAGCCCAC (5) 5.5 0.0055 E18.5 retina ACTGTGGAGG (5) 1.8 0.0018 E18.5 retina CAGGCCACCA (4) 1.8 0.0018 E18.5 retina CCTCCTCCAG (4) 1.8 0.0018 E18.5 retina GACCCCCCCC (14) 1.8 0.0018 P0.5 retina ACCCCACAGG (2) 3.9 0.0039 P0.5 retina CCTCCTCCAG (4) 3.9 0.0039 P0.5 retina ACTGTGGAGG (5) 2 0.002 P0.5 retina ACTGTGGGTA (2) 2 0.002 P0.5 retina CAGAGCCCAC (5) 2 0.002 P0.5 retina CCCCACCCAT (6) 2 0.002 P0.5 retina CTTTTTGTGA (2) 2 0.002 P2.5 retina CCTCCTCCAG (4) 8.8 0.0088 P2.5 retina CAGAGCCCAC (5) 5.3 0.0053 P2.5 retina ACCCACAAGA (4) 1.8 0.0018 P2.5 retina CTTTTTGTGA (2) 1.8 0.0018 P2.5 retina TACTGGGTCT (2) 1.8 0.0018 P4.5 retina CAGAGCCCAC (5) 5.9 0.0059 P4.5 retina CCTCCTCCAG (4) 4 0.004 P4.5 retina CAGAGCCACC (9) 2 0.002 P4.5 retina TACTGGGTCT (2) 2 0.002 P6.5 retina CCTCCTCCAG (4) 16.7 0.0167 P6.5 retina CAGAGCCCAC (5) 10 0.01 P6.5 retina ACCCACAAGA (4) 3.3 0.0033 P6.5 retina CCTCCTCCGG (4) 3.3 0.0033 P6.5 retina ACTGTGGGTA (2) 1.7 0.0017 P10.5 crx- retina CCTCCTCCAG (4) 39 0.039 P10.5 crx- retina CAGAGCCCAC (5) 3.7 0.0037 P10.5 crx- retina GGTGGTCTCA (3) 3.7 0.0037 P10.5 crx- retina ACCCACAAGA (4) 1.9 0.0019 P10.5 crx- retina ACCCCACAGG (2) 1.9 0.0019 P10.5 crx- retina ACTGTGGGTA (2) 1.9 0.0019 P10.5 crx- retina CTTTTTGTGA (2) 1.9 0.0019 P10.5 crx- retina GACCCCCCCC (14) 1.9 0.0019 P10.5 crx+ retina CCTCCTCCAG (4) 9.6 0.0096 P10.5 crx+ retina ACCCACAAGA (4) 5.8 0.0058 P10.5 crx+ retina CAGAGCCACC (9) 3.8 0.0038 P10.5 crx+ retina TACTGGGTCT (2) 3.8 0.0038 P10.5 crx+ retina CAGAGCCCAC (5) 1.9 0.0019 Adult retinal CCTCCTCCAG (4) 25.9 0.0259 Adult retinal CAGAGCCCAC (5) 13 0.013 Adult retinal CCCCACCCAT (6) 3.7 0.0037 Adult retinal ACCCACAAGA (4) 1.9 0.0019 Adult retinal ACCCCACAGG (2) 1.9 0.0019 Adult retinal CCTCCTCCGG (4) 1.9 0.0019 Adult retinal CTCTGTGAAT (8) 1.9 0.0019 Adult retinal GACCCCCCCC (14) 1.9 0.0019 Adult retinal TACTGGGTCT (2) 1.9 0.0019 ONL CAGAGCCCAC (5) 5.7 0.0057 ONL CAGGCCACCA (4) 1.9 0.0019 ONL CCTCCTCCGG (4) 1.9 0.0019