Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.275130
MGC78289
similar to hypothetical protein FLJ23825
11
238023
Human Homolog
FLJ23825[hypothetical protein FLJ23825]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 71 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAACTTGCAA
(
2
)
1.6
0.0016
P8 Cb GC
CAGTCGCTGC (
3
)
1.6
0.0016
P8 Cb GC
TAGAGCTTTA
(
3
)
1.6
0.0016
Cb medulloblastoma
CAACTTGCAA
(
2
)
4.6
0.0046
Cb medulloblastoma
TAGAGCTTTA
(
3
)
4.6
0.0046
Cb medulloblastoma
TGGAGGCCTG (
9
)
4.6
0.0046
P8 GC+1d culture
CAACTTGCAA
(
2
)
5.7
0.0057
P8 GC+1d culture
TCACTGGAAG
1.1
0.0011
P8 GC+1d culture
TGGAGGCCTG (
9
)
1.1
0.0011
P8 GC+SHH+1d culture
CAACTTGCAA
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
TGGAGGCCTG (
9
)
2.3
0.0023
3T3 fibroblasts
CAACTTGCAA
(
2
)
3.5
0.0035
3T3 fibroblasts
TGGAGGCCTG (
9
)
3.5
0.0035
E15 cortex
CCTTCAAAAC (
6
)
4.9
0.0049
E15 cortex
TCACTGGAAG
4.9
0.0049
P1 cortex
TAGAGCTTTA
(
3
)
9.1
0.0091
P1 cortex
TGGAGGCCTG (
9
)
9.1
0.0091
Hypothalamus
TAGAGCTTTA
(
3
)
9.1
0.0091
Hypothalamus
CAACTTGCAA
(
2
)
5.4
0.0054
Hypothalamus
TCACTGGAAG
5.4
0.0054
Hypothalamus
CCCCACAGAT
(
2
)
1.8
0.0018
Hypothalamus
CCTTCAAAAC (
6
)
1.8
0.0018
Hypothalamus
TGGAGGCCTG (
9
)
1.8
0.0018
E12.5 retina
CAACTTGCAA
(
2
)
3.8
0.0038
E12.5 retina
CAGTCGCTGC (
3
)
3.8
0.0038
E12.5 retina
TAGAGCTTTA
(
3
)
3.8
0.0038
E12.5 retina
TCACTGGAAG
1.9
0.0019
E12.5 retina
TGGAGGCCTG (
9
)
1.9
0.0019
E14.5 retina
TAGAGCTTTA
(
3
)
7.3
0.0073
E14.5 retina
CAACTTGCAA
(
2
)
5.5
0.0055
E14.5 retina
CAGTCGCTGC (
3
)
1.8
0.0018
E14.5 retina
CCCCACAGAT
(
2
)
1.8
0.0018
E16.5 retina
TAGAGCTTTA
(
3
)
10.9
0.0109
E16.5 retina
CAACTTGCAA
(
2
)
5.4
0.0054
E16.5 retina
CCTTCAAAAC (
6
)
1.8
0.0018
E16.5 retina
TCACTGGAAG
1.8
0.0018
E16.5 retina
TGGAGGCCTG (
9
)
1.8
0.0018
E18.5 retina
CAACTTGCAA
(
2
)
10.9
0.0109
E18.5 retina
CAGTCGCTGC (
3
)
1.8
0.0018
E18.5 retina
TAGAGCTTTA
(
3
)
1.8
0.0018
E18.5 retina
TGGAGGCCTG (
9
)
1.8
0.0018
P0.5 retina
TAGAGCTTTA
(
3
)
9.8
0.0098
P0.5 retina
TGGAGGCCTG (
9
)
3.9
0.0039
P0.5 retina
CAACTTGCAA
(
2
)
2
0.002
P2.5 retina
TAGAGCTTTA
(
3
)
8.8
0.0088
P2.5 retina
CAACTTGCAA
(
2
)
7
0.007
P2.5 retina
TGGAGGCCTG (
9
)
5.3
0.0053
P2.5 retina
TCACTGGAAG
3.5
0.0035
P2.5 retina
GCTCTGCATC (
3
)
1.8
0.0018
P4.5 retina
TAGAGCTTTA
(
3
)
13.9
0.0139
P4.5 retina
CAACTTGCAA
(
2
)
2
0.002
P4.5 retina
CAGTCGCTGC (
3
)
2
0.002
P4.5 retina
CCCCACAGAT
(
2
)
2
0.002
P6.5 retina
TAGAGCTTTA
(
3
)
15
0.015
P6.5 retina
CAACTTGCAA
(
2
)
6.7
0.0067
P6.5 retina
TCACTGGAAG
3.3
0.0033
P6.5 retina
TGGAGGCCTG (
9
)
3.3
0.0033
P6.5 retina
GCTCTGCATC (
3
)
1.7
0.0017
P10.5 crx- retina
TAGAGCTTTA
(
3
)
7.4
0.0074
P10.5 crx- retina
CAACTTGCAA
(
2
)
3.7
0.0037
P10.5 crx- retina
CCTTCAAAAC (
6
)
1.9
0.0019
P10.5 crx- retina
GCTCTGCATC (
3
)
1.9
0.0019
P10.5 crx+ retina
CAACTTGCAA
(
2
)
5.8
0.0058
P10.5 crx+ retina
TAGAGCTTTA
(
3
)
3.8
0.0038
P10.5 crx+ retina
GCTCTGCATC (
3
)
1.9
0.0019
Adult retinal
TAGAGCTTTA
(
3
)
11.1
0.0111
Adult retinal
CAGTCGCTGC (
3
)
1.9
0.0019
Adult retinal
TGGAGGCCTG (
9
)
1.9
0.0019
ONL
TAGAGCTTTA
(
3
)
11.5
0.0115
ONL
CAACTTGCAA
(
2
)
1.9
0.0019
ONL
CCCCACAGAT
(
2
)
1.9
0.0019
