Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275393	Ppp2r4	protein phosphatase 2A, regulatory subunit B (PR 53)	2	12 57.0 cM	110854
Gene Ontology	phosphatase activator activity
Human Homolog	PPP2R4[protein phosphatase 2A, regulatory subunit B' (PR 53)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTGCCCAG (2) 6.5 0.0065 P8 Cb GC ATGTAATGGT 3.3 0.0033 P8 Cb GC GGACAGGAAA (3) 3.3 0.0033 P8 Cb GC TGCCTGCTCC (3) 3.3 0.0033 P8 Cb GC AGGCTGCCCT 1.6 0.0016 P8 Cb GC CTGGCTTTGT (2) 1.6 0.0016 P8 Cb GC GCAGACAGGG (5) 1.6 0.0016 P8 Cb GC GTGACTGTTC (4) 1.6 0.0016 Cb medulloblastoma CTGGCTTTGT (2) 6.9 0.0069 Cb medulloblastoma TGCACAGCTT (4) 4.6 0.0046 Cb medulloblastoma GCAGACAGGG (5) 2.3 0.0023 Cb medulloblastoma GGCTGCCCAG (2) 2.3 0.0023 Cb medulloblastoma GTGACTGTTC (4) 2.3 0.0023 Cb medulloblastoma TGCGTATGTG 2.3 0.0023 P8 GC+1d culture TGCCTGCTCC (3) 17.1 0.0171 P8 GC+1d culture GTGACTGTTC (4) 9.1 0.0091 P8 GC+1d culture GCAGACAGGG (5) 5.7 0.0057 P8 GC+1d culture CTGGCTTTGT (2) 2.3 0.0023 P8 GC+1d culture GGACAGGAAA (3) 1.1 0.0011 P8 GC+1d culture GGCTGCCCAG (2) 1.1 0.0011 P8 GC+1d culture TGCACAGCTT (4) 1.1 0.0011 P8 GC+SHH+1d culture TGCCTGCTCC (3) 15.2 0.0152 P8 GC+SHH+1d culture GTGACTGTTC (4) 3.5 0.0035 P8 GC+SHH+1d culture AGACTGTGTG (4) 1.2 0.0012 P8 GC+SHH+1d culture CTGGCTTTGT (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTGCTTTGC 1.2 0.0012 P8 GC+SHH+1d culture GGACAGGAAA (3) 1.2 0.0012 3T3 fibroblasts TGCCTGCTCC (3) 24.5 0.0245 3T3 fibroblasts CTGGCTTTGT (2) 3.5 0.0035 3T3 fibroblasts GCTGGCCTTT (5) 3.5 0.0035 E15 cortex GTGACTGTTC (4) 14.8 0.0148 E15 cortex GCAGACAGGG (5) 4.9 0.0049 E15 cortex TGCACAGCTT (4) 4.9 0.0049 E15 cortex TGCCTGCTCC (3) 4.9 0.0049 P1 cortex CCTTTGCTTC (5) 4.5 0.0045 P1 cortex TGCCTGCTCC (3) 4.5 0.0045 Hypothalamus TGCACAGCTT (4) 19.9 0.0199 Hypothalamus TGCCTGCTCC (3) 14.5 0.0145 Hypothalamus TGCGTATGTG 14.5 0.0145 Hypothalamus CCTTTGCTTC (5) 5.4 0.0054 Hypothalamus ATGTAATGGT 1.8 0.0018 Hypothalamus CTGGCTTTGT (2) 1.8 0.0018 Hypothalamus GCAGACAGGG (5) 1.8 0.0018 E12.5 retina TGCCTGCTCC (3) 9.4 0.0094 E12.5 retina GGACAGGAAA (3) 3.8 0.0038 E12.5 retina AGGCTGCCCT 1.9 0.0019 E12.5 retina CTGGCTTTGT (2) 1.9 0.0019 E12.5 retina GTGACTGTTC (4) 1.9 0.0019 E14.5 retina TGCACAGCTT (4) 12.8 0.0128 E14.5 retina TGCCTGCTCC (3) 10.9 0.0109 E14.5 retina AGACTGTGTG (4) 1.8 0.0018 E14.5 retina CTGGCTTTGT (2) 1.8 0.0018 E16.5 retina TGCCTGCTCC (3) 18.1 0.0181 E16.5 retina GTGACTGTTC (4) 5.4 0.0054 E16.5 retina CTGGCTTTGT (2) 3.6 0.0036 E16.5 retina GCTGGCCTTT (5) 1.8 0.0018 E18.5 retina TGCCTGCTCC (3) 16.4 0.0164 E18.5 retina GGACAGGAAA (3) 3.6 0.0036 E18.5 retina CTGGCTTTGT (2) 1.8 0.0018 E18.5 retina GCTGGCCTTT (5) 1.8 0.0018 E18.5 retina GTGACTGTTC (4) 1.8 0.0018 P0.5 retina CTGGCTTTGT (2) 5.9 0.0059 P0.5 retina GTGACTGTTC (4) 5.9 0.0059 P0.5 retina TGCCTGCTCC (3) 3.9 0.0039 P0.5 retina CTTGCTTTGC 2 0.002 P0.5 retina GGACAGGAAA (3) 2 0.002 P2.5 retina TGCCTGCTCC (3) 10.6 0.0106 P2.5 retina GGTGCACGTG 3.5 0.0035 P2.5 retina CTGGCTTTGT (2) 1.8 0.0018 P2.5 retina GTGACTGTTC (4) 1.8 0.0018 P4.5 retina TGCCTGCTCC (3) 17.8 0.0178 P4.5 retina CTGGCTTTGT (2) 4 0.004 P4.5 retina GTGACTGTTC (4) 4 0.004 P4.5 retina GGACAGGAAA (3) 2 0.002 P6.5 retina TGCCTGCTCC (3) 21.7 0.0217 P6.5 retina GTGACTGTTC (4) 5 0.005 P6.5 retina CTGGCTTTGT (2) 3.3 0.0033 P6.5 retina TGCACAGCTT (4) 3.3 0.0033 P6.5 retina AGGCTGCCCT 1.7 0.0017 P6.5 retina GGCTGCCCAG (2) 1.7 0.0017 P6.5 retina GGTGCACGTG 1.7 0.0017 P10.5 crx- retina GTGACTGTTC (4) 13 0.013 P10.5 crx- retina TGCCTGCTCC (3) 9.3 0.0093 P10.5 crx- retina AGACTGTGTG (4) 1.9 0.0019 P10.5 crx- retina CTGGCTTTGT (2) 1.9 0.0019 P10.5 crx- retina TGCACAGCTT (4) 1.9 0.0019 P10.5 crx+ retina TGCCTGCTCC (3) 23.1 0.0231 P10.5 crx+ retina GGACAGGAAA (3) 7.7 0.0077 P10.5 crx+ retina AGACTGTGTG (4) 1.9 0.0019 P10.5 crx+ retina CTGGCTTTGT (2) 1.9 0.0019 P10.5 crx+ retina GTGACTGTTC (4) 1.9 0.0019 P10.5 crx+ retina TGCGTATGTG 1.9 0.0019 Adult retinal CTGGCTTTGT (2) 7.4 0.0074 Adult retinal GTGACTGTTC (4) 7.4 0.0074 Adult retinal TGCCTGCTCC (3) 7.4 0.0074 Adult retinal GGCTGCCCAG (2) 5.6 0.0056 Adult retinal GCAGACAGGG (5) 3.7 0.0037 Adult retinal TGCGTATGTG 1.9 0.0019 ONL TGCCTGCTCC (3) 13.4 0.0134 ONL AGGCTGCCCT 1.9 0.0019 ONL CTTGCTTTGC 1.9 0.0019 ONL GGCTGCCCAG (2) 1.9 0.0019 ONL GTGACTGTTC (4) 1.9 0.0019