Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275452	H2-Ke6	H2-K region expressed gene 6	17	17 18.48 cM	14979
Gene Ontology	mitochondrion
Human Homolog	HSD17B8[hydroxysteroid (17-beta) dehydrogenase 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGAATATGG 8.2 0.0082 P8 Cb GC TGGAAGAAAC (7) 8.2 0.0082 P8 Cb GC AAGAAGACTG (3) 1.6 0.0016 P8 Cb GC GAGGAAAAAA (8) 1.6 0.0016 P8 Cb GC TAACTGCCTG (2) 1.6 0.0016 Cb medulloblastoma TGGAAGAAAC (7) 37 0.037 Cb medulloblastoma CTGAATATGG 6.9 0.0069 Cb medulloblastoma AAGAAGACTG (3) 4.6 0.0046 P8 GC+1d culture AAGAAGACTG (3) 9.1 0.0091 P8 GC+1d culture TGGAAGAAAC (7) 6.8 0.0068 P8 GC+1d culture CTGAATATGG 5.7 0.0057 P8 GC+1d culture TAACTGCCTG (2) 2.3 0.0023 P8 GC+SHH+1d culture TGGAAGAAAC (7) 9.4 0.0094 P8 GC+SHH+1d culture AAGAAGACTG (3) 8.2 0.0082 P8 GC+SHH+1d culture CTGAATATGG 7 0.007 P8 GC+SHH+1d culture TAACTGCCTG (2) 2.3 0.0023 P8 GC+SHH+1d culture GAGGAAAAAA (8) 1.2 0.0012 3T3 fibroblasts AAGAAGACTG (3) 17.5 0.0175 3T3 fibroblasts TAACTGCCTG (2) 7 0.007 3T3 fibroblasts TGGAAGAAAC (7) 7 0.007 E15 cortex ACCCAGAAAA 4.9 0.0049 E15 cortex TAACTGCCTG (2) 4.9 0.0049 P1 cortex CTGAATATGG 4.5 0.0045 Hypothalamus TGGAAGAAAC (7) 19.9 0.0199 Hypothalamus CTGAATATGG 5.4 0.0054 Hypothalamus TAACTGCCTG (2) 5.4 0.0054 Hypothalamus ACCCAGAAAA 1.8 0.0018 E12.5 retina TGGAAGAAAC (7) 18.8 0.0188 E12.5 retina CTGAATATGG 9.4 0.0094 E12.5 retina AAGAAGACTG (3) 1.9 0.0019 E12.5 retina GAGGAAAAAA (8) 1.9 0.0019 E12.5 retina TAACTGCCTG (2) 1.9 0.0019 E12.5 retina TCAGAAGAAG (8) 1.9 0.0019 E14.5 retina TAACTGCCTG (2) 9.1 0.0091 E14.5 retina CTGAATATGG 7.3 0.0073 E14.5 retina TGGAAGAAAC (7) 5.5 0.0055 E14.5 retina GAGGAAAAAA (8) 1.8 0.0018 E14.5 retina TCAGAAGAAG (8) 1.8 0.0018 E16.5 retina TGGAAGAAAC (7) 16.3 0.0163 E16.5 retina CTGAATATGG 14.5 0.0145 E16.5 retina TAACTGCCTG (2) 5.4 0.0054 E16.5 retina CCTGAGCCAC 1.8 0.0018 E16.5 retina GAGGAAAAAA (8) 1.8 0.0018 E18.5 retina CTGAATATGG 7.3 0.0073 E18.5 retina TGGAAGAAAC (7) 7.3 0.0073 E18.5 retina AAGAAGACTG (3) 1.8 0.0018 E18.5 retina TAACTGCCTG (2) 1.8 0.0018 P0.5 retina CTGAATATGG 13.7 0.0137 P0.5 retina AAGAAGACTG (3) 9.8 0.0098 P0.5 retina TAACTGCCTG (2) 3.9 0.0039 P0.5 retina TGGAAGAAAC (7) 2 0.002 P2.5 retina CTGAATATGG 19.4 0.0194 P2.5 retina TGGAAGAAAC (7) 10.6 0.0106 P2.5 retina GAGGAAAAAA (8) 1.8 0.0018 P4.5 retina CTGAATATGG 17.8 0.0178 P4.5 retina TGGAAGAAAC (7) 7.9 0.0079 P4.5 retina AAGAAGACTG (3) 2 0.002 P4.5 retina ACCCAGAAAA 2 0.002 P6.5 retina CTGAATATGG 8.3 0.0083 P6.5 retina TGGAAGAAAC (7) 8.3 0.0083 P6.5 retina AAGAAGACTG (3) 3.3 0.0033 P6.5 retina TAACTGCCTG (2) 3.3 0.0033 P6.5 retina GAGGAAAAAA (8) 1.7 0.0017 P10.5 crx- retina TGGAAGAAAC (7) 31.6 0.0316 P10.5 crx- retina TAACTGCCTG (2) 7.4 0.0074 P10.5 crx- retina CTGAATATGG 1.9 0.0019 P10.5 crx+ retina CTGAATATGG 9.6 0.0096 P10.5 crx+ retina TGGAAGAAAC (7) 9.6 0.0096 P10.5 crx+ retina CCTGAGCCAC 1.9 0.0019 P10.5 crx+ retina TAACTGCCTG (2) 1.9 0.0019 P10.5 crx+ retina TCAGAAGAAG (8) 1.9 0.0019 Adult retinal CTGAATATGG 14.8 0.0148 Adult retinal AAGAAGACTG (3) 5.6 0.0056 Adult retinal TGGAAGAAAC (7) 5.6 0.0056 Adult retinal CCTGAGCCAC 1.9 0.0019 Adult retinal GAGGAAAAAA (8) 1.9 0.0019 ONL TGGAAGAAAC (7) 7.7 0.0077 ONL CTGAATATGG 5.7 0.0057 ONL AAGAAGACTG (3) 3.8 0.0038 ONL GAGGAAAAAA (8) 1.9 0.0019 ONL TAACTGCCTG (2) 1.9 0.0019