Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27557	Cdk9	cyclin-dependent kinase 9 (CDC2-related kinase)	2		107951
Gene Ontology	ATP binding | cell cycle | cell proliferation | cyclin-dependent protein kinase activity | kinase activity | nucleic acid binding | nucleus | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | regulation of cell cycle | RNA elongation from Pol II promoter | transcription elongation factor complex | transcription initiation from Pol II promoter | transferase activity
Human Homolog	CDK9[cyclin-dependent kinase 9 (CDC2-related kinase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGGAGATTA (4) 4.9 0.0049 P8 Cb GC CAGGGTACCA (3) 3.3 0.0033 P8 Cb GC GCAGAGATGG (6) 1.6 0.0016 P8 Cb GC GTGGGAGGAA (5) 1.6 0.0016 Cb medulloblastoma GTGGGAGGAG (5) 6.9 0.0069 Cb medulloblastoma CAGGGTACCA (3) 4.6 0.0046 Cb medulloblastoma GTGGGAGGAA (5) 4.6 0.0046 Cb medulloblastoma GCAGAGATGG (6) 2.3 0.0023 Cb medulloblastoma GCCAAGCAGT (2) 2.3 0.0023 P8 GC+1d culture GTGGGAGGAA (5) 6.8 0.0068 P8 GC+1d culture AGGGAGATTA (4) 2.3 0.0023 P8 GC+1d culture CAAGGGTAAC (2) 2.3 0.0023 P8 GC+1d culture CAGGGTACCA (3) 1.1 0.0011 P8 GC+1d culture GCAGAGATGG (6) 1.1 0.0011 P8 GC+1d culture GTGGGAGGAG (5) 1.1 0.0011 P8 GC+SHH+1d culture GTGGGAGGAA (5) 4.7 0.0047 P8 GC+SHH+1d culture AGGGAGATTA (4) 1.2 0.0012 P8 GC+SHH+1d culture CAGGGTACCA (3) 1.2 0.0012 P8 GC+SHH+1d culture CTCACAGAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGAGGAG (5) 1.2 0.0012 3T3 fibroblasts GTGGGAGGAG (5) 10.5 0.0105 3T3 fibroblasts AGGGAGATTA (4) 7 0.007 3T3 fibroblasts GTGGGAGGAA (5) 7 0.007 3T3 fibroblasts CTCACAGAAG (2) 3.5 0.0035 3T3 fibroblasts GCAGAGATGG (6) 3.5 0.0035 E15 cortex CAGGGTACCA (3) 14.8 0.0148 P1 cortex GTGGGAGGAA (5) 4.5 0.0045 P1 cortex GTGGGAGGAG (5) 4.5 0.0045 Hypothalamus AGGGAGATTA (4) 1.8 0.0018 Hypothalamus GTGGGAGGAA (5) 1.8 0.0018 Hypothalamus GTGGGAGGAG (5) 1.8 0.0018 E12.5 retina GTGGGAGGAA (5) 18.8 0.0188 E12.5 retina AGGGAGATTA (4) 3.8 0.0038 E12.5 retina GCAGAGATGG (6) 3.8 0.0038 E12.5 retina GTGGGAGGAG (5) 3.8 0.0038 E14.5 retina GTGGGAGGAA (5) 7.3 0.0073 E14.5 retina CACAGGAAGC (6) 3.6 0.0036 E14.5 retina GCAGAGATGG (6) 1.8 0.0018 E16.5 retina GTGGGAGGAA (5) 10.9 0.0109 E16.5 retina AGGGAGATTA (4) 5.4 0.0054 E16.5 retina GCAGAGATGG (6) 3.6 0.0036 E18.5 retina AGGGAGATTA (4) 3.6 0.0036 E18.5 retina CTCACAGAAG (2) 1.8 0.0018 E18.5 retina GCAGAGATGG (6) 1.8 0.0018 E18.5 retina GTGGGAGGAG (5) 1.8 0.0018 P0.5 retina GTGGGAGGAA (5) 9.8 0.0098 P0.5 retina GCAGAGATGG (6) 3.9 0.0039 P0.5 retina GTGGGAGGAG (5) 3.9 0.0039 P0.5 retina CTCACAGAAG (2) 2 0.002 P2.5 retina CAGGGTACCA (3) 7 0.007 P2.5 retina GTGGGAGGAA (5) 7 0.007 P2.5 retina AGGGAGATTA (4) 1.8 0.0018 P2.5 retina GCAGAGATGG (6) 1.8 0.0018 P4.5 retina GTGGGAGGAA (5) 7.9 0.0079 P4.5 retina GTGGGAGGAG (5) 4 0.004 P4.5 retina CAAGGGTAAC (2) 2 0.002 P4.5 retina CAGGGTACCA (3) 2 0.002 P6.5 retina GTGGGAGGAA (5) 13.3 0.0133 P6.5 retina GCAGAGATGG (6) 6.7 0.0067 P6.5 retina AGGGAGATTA (4) 3.3 0.0033 P6.5 retina CAAGGGTAAC (2) 1.7 0.0017 P6.5 retina CAGGGTACCA (3) 1.7 0.0017 P10.5 crx- retina AGGGAGATTA (4) 11.1 0.0111 P10.5 crx- retina GCAGAGATGG (6) 5.6 0.0056 P10.5 crx- retina GTGGGAGGAA (5) 3.7 0.0037 P10.5 crx- retina CAGGGTACCA (3) 1.9 0.0019 P10.5 crx+ retina AGGGAGATTA (4) 11.5 0.0115 P10.5 crx+ retina GCAGAGATGG (6) 7.7 0.0077 P10.5 crx+ retina GTGGGAGGAA (5) 7.7 0.0077 P10.5 crx+ retina CACAGGAAGC (6) 1.9 0.0019 P10.5 crx+ retina GCCAAGCAGT (2) 1.9 0.0019 P10.5 crx+ retina GTGGGAGGAG (5) 1.9 0.0019 Adult retinal GCAGAGATGG (6) 27.8 0.0278 Adult retinal AGGGAGATTA (4) 3.7 0.0037 Adult retinal GTGGGAGGAA (5) 3.7 0.0037 Adult retinal GTGGGAGGAG (5) 3.7 0.0037 Adult retinal CAAGGGTAAC (2) 1.9 0.0019 Adult retinal CAGGGTACCA (3) 1.9 0.0019 Adult retinal GCCAAGCAGT (2) 1.9 0.0019 ONL GCAGAGATGG (6) 19.2 0.0192 ONL AGGGAGATTA (4) 5.7 0.0057 ONL CAGGGTACCA (3) 3.8 0.0038 ONL GTGGGAGGAA (5) 1.9 0.0019