Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.275648
AV007930
expressed sequence AV007930
13
105315
Mm.275648
Pdlim7
PDZ and LIM domain 7
13
67399
Human Homolog
PDLIM7[PDZ and LIM domain 7 (enigma)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCCTTCCCA
(
7
)
6.5
0.0065
P8 Cb GC
GAAATAAACA
(
5
)
4.9
0.0049
Cb medulloblastoma
CCCCTTCCCA
(
7
)
18.5
0.0185
Cb medulloblastoma
GAAATAAACA
(
5
)
2.3
0.0023
Cb medulloblastoma
GAGGGTAGGA
(
3
)
2.3
0.0023
P8 GC+1d culture
CCCCTTCCCA
(
7
)
9.1
0.0091
P8 GC+1d culture
GAAATAAACA
(
5
)
4.6
0.0046
P8 GC+1d culture
CTTTGTTTGC
(
2
)
1.1
0.0011
P8 GC+1d culture
GAAGCCCAGA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CCCCTTCCCA
(
7
)
11.7
0.0117
P8 GC+SHH+1d culture
GAAGCCCAGA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGGGTAGGA
(
3
)
1.2
0.0012
P1 cortex
CCCCTTCCCA
(
7
)
4.5
0.0045
P1 cortex
CTTTGTTTGC
(
2
)
4.5
0.0045
P1 cortex
GAAATAAACA
(
5
)
4.5
0.0045
Hypothalamus
GAAATAAACA
(
5
)
12.7
0.0127
Hypothalamus
CCCCTTCCCA
(
7
)
3.6
0.0036
E12.5 retina
GAAATAAACA
(
5
)
3.8
0.0038
E12.5 retina
CCCCTTCCCA
(
7
)
1.9
0.0019
E12.5 retina
GAAGCCCAGA
(
4
)
1.9
0.0019
E14.5 retina
GAAATAAACA
(
5
)
9.1
0.0091
E14.5 retina
AAGAAGTCAA
(
5
)
3.6
0.0036
E16.5 retina
GAAATAAACA
(
5
)
7.2
0.0072
E16.5 retina
AAGAAGTCAA
(
5
)
1.8
0.0018
E16.5 retina
CTTTGTTTGC
(
2
)
1.8
0.0018
E18.5 retina
GAAATAAACA
(
5
)
7.3
0.0073
E18.5 retina
CCCCTTCCCA
(
7
)
3.6
0.0036
P0.5 retina
CTTTGTTTGC
(
2
)
3.9
0.0039
P0.5 retina
GAAATAAACA
(
5
)
3.9
0.0039
P0.5 retina
GAAGCCCAGA
(
4
)
3.9
0.0039
P2.5 retina
GAAATAAACA
(
5
)
5.3
0.0053
P2.5 retina
CCCCTTCCCA
(
7
)
1.8
0.0018
P4.5 retina
GAAATAAACA
(
5
)
7.9
0.0079
P4.5 retina
CCCCTTCCCA
(
7
)
5.9
0.0059
P6.5 retina
GAAATAAACA
(
5
)
13.3
0.0133
P6.5 retina
CCCCTTCCCA
(
7
)
6.7
0.0067
P10.5 crx- retina
GAGGGTAGGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
GAAATAAACA
(
5
)
3.8
0.0038
P10.5 crx+ retina
CCCCTTCCCA
(
7
)
1.9
0.0019
Adult retinal
CCAGCTGAAG
(
4
)
7.4
0.0074
Adult retinal
CCCCTTCCCA
(
7
)
7.4
0.0074
Adult retinal
GAAATAAACA
(
5
)
1.9
0.0019
ONL
CCAGCTGAAG
(
4
)
5.7
0.0057
ONL
GAAATAAACA
(
5
)
1.9
0.0019
ONL
GAGGGTAGGA
(
3
)
1.9
0.0019
