Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.275673
4930488B01Rik
RIKEN cDNA 4930488B01 gene
7
75036
Mm.275673
0710005I19Rik
RIKEN cDNA 0710005I19 gene
7
71691
Human Homolog
FLJ10781[hypothetical protein FLJ10781]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GATGCTGCCA (
3
)
26.1
0.0261
P8 Cb GC
GGAATGGACA
(
7
)
1.6
0.0016
P8 Cb GC
TGTGTGTATG (
18
)
1.6
0.0016
Cb medulloblastoma
GATGCTGCCA (
3
)
2.3
0.0023
P8 GC+1d culture
GATGCTGCCA (
3
)
32
0.032
P8 GC+1d culture
ACCACTCCCA
(
2
)
2.3
0.0023
P8 GC+1d culture
TAGACATTTT
(
6
)
2.3
0.0023
P8 GC+1d culture
TGTGTGTATG (
18
)
2.3
0.0023
P8 GC+1d culture
GCCACTCCCC (
8
)
1.1
0.0011
P8 GC+1d culture
GGAATGGACA
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
GATGCTGCCA (
3
)
19.9
0.0199
P8 GC+SHH+1d culture
ACCACTCCCA
(
2
)
1.2
0.0012
3T3 fibroblasts
GATGCTGCCA (
3
)
17.5
0.0175
E15 cortex
GATGCTGCCA (
3
)
49.5
0.0495
E15 cortex
GGGTCCTCTT (
6
)
14.8
0.0148
P1 cortex
ACCACTCCCA
(
2
)
4.5
0.0045
P1 cortex
GATGCTGCCA (
3
)
4.5
0.0045
Hypothalamus
GATGCTGCCA (
3
)
3.6
0.0036
Hypothalamus
GCCACTCCCC (
8
)
1.8
0.0018
Hypothalamus
GGAATGGACA
(
7
)
1.8
0.0018
Hypothalamus
TGTGTGTATG (
18
)
1.8
0.0018
E12.5 retina
GATGCTGCCA (
3
)
35.7
0.0357
E12.5 retina
GGGTCCTCTT (
6
)
7.5
0.0075
E12.5 retina
GGGAAGGGCA (
5
)
1.9
0.0019
E14.5 retina
GATGCTGCCA (
3
)
16.4
0.0164
E14.5 retina
ACCACTCCCA
(
2
)
1.8
0.0018
E16.5 retina
GATGCTGCCA (
3
)
41.7
0.0417
E16.5 retina
ACCACTCCCA
(
2
)
3.6
0.0036
E16.5 retina
TGTGTGTATG (
18
)
3.6
0.0036
E16.5 retina
GGGTCCTCTT (
6
)
1.8
0.0018
E18.5 retina
GGGTCCTCTT (
6
)
16.4
0.0164
E18.5 retina
GATGCTGCCA (
3
)
10.9
0.0109
E18.5 retina
GGGAAGGGCA (
5
)
3.6
0.0036
E18.5 retina
TAGACATTTT
(
6
)
1.8
0.0018
E18.5 retina
TGTGTGTATG (
18
)
1.8
0.0018
P0.5 retina
GATGCTGCCA (
3
)
29.4
0.0294
P0.5 retina
GGGTCCTCTT (
6
)
3.9
0.0039
P2.5 retina
GATGCTGCCA (
3
)
12.3
0.0123
P2.5 retina
GGGTCCTCTT (
6
)
10.6
0.0106
P2.5 retina
GCCACTCCCC (
8
)
1.8
0.0018
P2.5 retina
TAGACATTTT
(
6
)
1.8
0.0018
P4.5 retina
GATGCTGCCA (
3
)
11.9
0.0119
P4.5 retina
GGGTCCTCTT (
6
)
4
0.004
P4.5 retina
ACCACTCCCA
(
2
)
2
0.002
P4.5 retina
GCCACTCCCC (
8
)
2
0.002
P4.5 retina
TAGACATTTT
(
6
)
2
0.002
P6.5 retina
GGGTCCTCTT (
6
)
6.7
0.0067
P6.5 retina
GATGCTGCCA (
3
)
5
0.005
P6.5 retina
ACCACTCCCA
(
2
)
1.7
0.0017
P10.5 crx- retina
GGGTCCTCTT (
6
)
5.6
0.0056
P10.5 crx+ retina
ACCACTCCCA
(
2
)
7.7
0.0077
P10.5 crx+ retina
GGGTCCTCTT (
6
)
5.8
0.0058
Adult retinal
GATGCTGCCA (
3
)
16.7
0.0167
Adult retinal
GGGAAGGGCA (
5
)
1.9
0.0019
Adult retinal
GGGTCCTCTT (
6
)
1.9
0.0019
ONL
GATGCTGCCA (
3
)
9.6
0.0096
ONL
GGGTCCTCTT (
6
)
5.7
0.0057
ONL
ACCACTCCCA
(
2
)
1.9
0.0019
ONL
GGAATGGACA
(
7
)
1.9
0.0019
ONL
TGTGTGTATG (
18
)
1.9
0.0019
