Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275683	5730409L17Rik	RIKEN cDNA 5730409L17 gene	6		70499
Mm.275683	Ica1	islet cell autoantigen 1	6	6 2.9 cM	15893
Gene Ontology	cytoplasm | Golgi apparatus | membrane | neurotransmitter transport | transport
Human Homolog	ICA1[islet cell autoantigen 1, 69kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC TATTTTACCT (4) 8.2 0.0082 P8 Cb GC TGGTTGCTTC (4) 1.6 0.0016 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma CCATTTTAAT (4) 2.3 0.0023 Cb medulloblastoma TATTTTACCT (4) 2.3 0.0023 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture TATTTTACCT (4) 5.7 0.0057 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture CCATTTTAAT (4) 2.3 0.0023 P8 GC+SHH+1d culture TATTTTACCT (4) 2.3 0.0023 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts TGGTTGCTTC (4) 3.5 0.0035 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus GGGGCCCAAG (2) 5.4 0.0054 Hypothalamus TATTTTACCT (4) 5.4 0.0054 Hypothalamus CCATTTTAAT (4) 3.6 0.0036 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina CCATTTTAAT (4) 1.9 0.0019 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina TATTTTACCT (4) 3.6 0.0036 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina TATTTTACCT (4) 3.6 0.0036 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina TATTTTACCT (4) 7.3 0.0073 E18.5 retina TGGTTGCTTC (4) 1.8 0.0018 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina TATTTTACCT (4) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina TATTTTACCT (4) 2 0.002 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina CCATTTTAAT (4) 1.9 0.0019 P10.5 crx- retina TATTTTACCT (4) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina TATTTTACCT (4) 3.8 0.0038 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 ONL TGTGTGTGTG (115) 23 0.023 ONL TATTTTACCT (4) 1.9 0.0019