Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27570	Ndufa6	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	15		67130
Gene Ontology	electron transport | mitochondrial inner membrane | mitochondrion | mitochondrion | NADH dehydrogenase activity | oxidoreductase activity | oxidoreductase activity, acting on NADH or NADPH
Human Homolog	NDUFA6[NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCGCACG (61) 13.1 0.0131 P8 Cb GC TTAATATTTA (3) 9.8 0.0098 P8 Cb GC GGAAGCCCCT (4) 1.6 0.0016 P8 Cb GC TATTTAACTT (2) 1.6 0.0016 Cb medulloblastoma TTAATATTTA (3) 13.9 0.0139 Cb medulloblastoma GTGGCGCACG (61) 6.9 0.0069 Cb medulloblastoma TATTTAACTT (2) 4.6 0.0046 P8 GC+1d culture TTAATATTTA (3) 25.1 0.0251 P8 GC+1d culture GTGGCGCACG (61) 6.8 0.0068 P8 GC+1d culture TATTTAACTT (2) 4.6 0.0046 P8 GC+1d culture TGCCCCCCCC (5) 2.3 0.0023 P8 GC+SHH+1d culture TTAATATTTA (3) 10.5 0.0105 P8 GC+SHH+1d culture TATTTAACTT (2) 9.4 0.0094 P8 GC+SHH+1d culture GTGGCGCACG (61) 2.3 0.0023 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 3T3 fibroblasts GTGGCGCACG (61) 63.1 0.0631 E15 cortex GTGGCGCACG (61) 113.8 0.1138 P1 cortex GTGGCGCACG (61) 18.2 0.0182 P1 cortex TTAATATTTA (3) 13.6 0.0136 P1 cortex GGAAGCCCCT (4) 4.5 0.0045 P1 cortex TATTTAACTT (2) 4.5 0.0045 Hypothalamus TTAATATTTA (3) 39.8 0.0398 Hypothalamus GTGGCGCACG (61) 3.6 0.0036 Hypothalamus TATTTAACTT (2) 1.8 0.0018 E12.5 retina GTGGCGCACG (61) 11.3 0.0113 E12.5 retina TTAATATTTA (3) 7.5 0.0075 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina GGAAGCCCCT (4) 1.9 0.0019 E12.5 retina TATTTAACTT (2) 1.9 0.0019 E14.5 retina GTGGCGCACG (61) 29.2 0.0292 E14.5 retina TTAATATTTA (3) 25.5 0.0255 E14.5 retina TGCCCCCCCC (5) 3.6 0.0036 E14.5 retina TCACAGACCC (2) 1.8 0.0018 E16.5 retina GTGGCGCACG (61) 25.4 0.0254 E16.5 retina TTAATATTTA (3) 12.7 0.0127 E16.5 retina GGAAGCCCCT (4) 3.6 0.0036 E16.5 retina TCACAGACCC (2) 3.6 0.0036 E18.5 retina TTAATATTTA (3) 23.6 0.0236 E18.5 retina GTGGCGCACG (61) 10.9 0.0109 E18.5 retina GGAAGCCCCT (4) 5.5 0.0055 E18.5 retina TCACAGACCC (2) 1.8 0.0018 P0.5 retina GTGGCGCACG (61) 25.5 0.0255 P0.5 retina TTAATATTTA (3) 3.9 0.0039 P0.5 retina TCACAGACCC (2) 2 0.002 P0.5 retina TGCCCCCCCC (5) 2 0.002 P2.5 retina GTGGCGCACG (61) 17.6 0.0176 P2.5 retina TTAATATTTA (3) 14.1 0.0141 P2.5 retina TATTTAACTT (2) 3.5 0.0035 P2.5 retina TGCCCCCCCC (5) 1.8 0.0018 P4.5 retina GTGGCGCACG (61) 17.8 0.0178 P4.5 retina TTAATATTTA (3) 7.9 0.0079 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina GGAAGCCCCT (4) 2 0.002 P6.5 retina GTGGCGCACG (61) 38.3 0.0383 P6.5 retina TTAATATTTA (3) 23.3 0.0233 P6.5 retina TATTTAACTT (2) 8.3 0.0083 P10.5 crx- retina GTGGCGCACG (61) 13 0.013 P10.5 crx- retina TTAATATTTA (3) 13 0.013 P10.5 crx- retina GGAAGCCCCT (4) 1.9 0.0019 P10.5 crx+ retina GTGGCGCACG (61) 32.7 0.0327 P10.5 crx+ retina TTAATATTTA (3) 9.6 0.0096 P10.5 crx+ retina AACATTTCTC (3) 1.9 0.0019 P10.5 crx+ retina TGCCCCCCCC (5) 1.9 0.0019 Adult retinal GTGGCGCACG (61) 22.2 0.0222 Adult retinal TTAATATTTA (3) 3.7 0.0037 Adult retinal GGAAGCCCCT (4) 1.9 0.0019 ONL GTGGCGCACG (61) 23 0.023 ONL TTAATATTTA (3) 17.2 0.0172 ONL AACATTTCTC (3) 1.9 0.0019 ONL TATTTAACTT (2) 1.9 0.0019