Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275728	6330549H03Rik	RIKEN cDNA 6330549H03 gene	12		108667
Mm.275728	AA675043	expressed sequence AA675043	8		101972
Mm.275728	Gtf2a1	general transcription factor II A, 1	12		83602
Gene Ontology	nucleus | transcription initiation factor activity | transcription initiation from Pol II promoter
Human Homolog	GTF2A1[general transcription factor IIA, 1, 19/37kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGATTTTAA (3) 1.6 0.0016 P8 Cb GC TCTCCTTCCT (7) 1.6 0.0016 P8 Cb GC TTTGACAATG (5) 1.6 0.0016 Cb medulloblastoma CAGATTTTAA (3) 11.6 0.0116 Cb medulloblastoma TTTGACAATG (5) 4.6 0.0046 P8 GC+1d culture CAGATTTTAA (3) 3.4 0.0034 P8 GC+1d culture GAAGTGTGTG (4) 1.1 0.0011 P8 GC+1d culture GAGCTGCAGT (5) 1.1 0.0011 P8 GC+SHH+1d culture CAGATTTTAA (3) 3.5 0.0035 P8 GC+SHH+1d culture AAATGAAAAT (10) 1.2 0.0012 P8 GC+SHH+1d culture GAAGTGTGTG (4) 1.2 0.0012 P8 GC+SHH+1d culture GAGCTGCAGT (5) 1.2 0.0012 P1 cortex AAATGAAAAT (10) 4.5 0.0045 Hypothalamus CAGATTTTAA (3) 3.6 0.0036 Hypothalamus TTTCCTTAGA (4) 1.8 0.0018 E12.5 retina CAGATTTTAA (3) 3.8 0.0038 E12.5 retina TTTGACAATG (5) 1.9 0.0019 E14.5 retina CAGATTTTAA (3) 1.8 0.0018 E14.5 retina TCTCCTTCCT (7) 1.8 0.0018 E18.5 retina CAGATTTTAA (3) 1.8 0.0018 E18.5 retina TTTCCTTAGA (4) 1.8 0.0018 P0.5 retina CAGATTTTAA (3) 3.9 0.0039 P0.5 retina AAATGAAAAT (10) 2 0.002 P2.5 retina CAGATTTTAA (3) 3.5 0.0035 P2.5 retina AAATGAAAAT (10) 1.8 0.0018 P4.5 retina GAGCTGCAGT (5) 2 0.002 P6.5 retina GAGCTGCAGT (5) 3.3 0.0033 P6.5 retina AAATGAAAAT (10) 1.7 0.0017 P6.5 retina CAGATTTTAA (3) 1.7 0.0017 P6.5 retina TTTCCTTAGA (4) 1.7 0.0017 P10.5 crx- retina GAGCTGCAGT (5) 1.9 0.0019 P10.5 crx+ retina CAGATTTTAA (3) 3.8 0.0038 P10.5 crx+ retina GAAGTGTGTG (4) 1.9 0.0019 Adult retinal CAGATTTTAA (3) 1.9 0.0019 Adult retinal TTTCCTTAGA (4) 1.9 0.0019 ONL AAATGAAAAT (10) 1.9 0.0019 ONL CAGATTTTAA (3) 1.9 0.0019 ONL GAAGTGTGTG (4) 1.9 0.0019