Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.276133
AA522013
EST AA522013
6
57884
Mm.276133
E130108L08Rik
RIKEN cDNA E130108L08 gene
6
78000
Mm.276133
Luc7l2
LUC7-like 2 (S. cerevisiae)
6
192196
Human Homolog
LUC7L2[LUC7-like 2 (S. cerevisiae)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 111 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
TTCAAAAGAG
(
4
)
4.9
0.0049
P8 Cb GC
CTACTAACCC
(
8
)
1.6
0.0016
P8 Cb GC
GAGTCCTGAC (
7
)
1.6
0.0016
P8 Cb GC
TGAATAACAA
(
3
)
1.6
0.0016
P8 Cb GC
TGAATGAGAA
(
5
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GAGTCCTGAC (
7
)
2.3
0.0023
Cb medulloblastoma
TTCAAAAGAG
(
4
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
TTCAAAAGAG
(
4
)
5.7
0.0057
P8 GC+1d culture
CAAACATAGC
(
3
)
4.6
0.0046
P8 GC+1d culture
AGCCGGAGTA
(
3
)
3.4
0.0034
P8 GC+1d culture
AGACCCTGCC (
5
)
1.1
0.0011
P8 GC+1d culture
TGAATGAGAA
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
CAAACATAGC
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
TGAATAAAAA (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
AGCCGGAGTA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TTCAAAAGAG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGCCGGGCGT (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CTACTAACCC
(
8
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
AGACCCTGCC (
5
)
3.5
0.0035
3T3 fibroblasts
AGCCGGAGTA
(
3
)
3.5
0.0035
3T3 fibroblasts
AGCCGGGCGT (
3
)
3.5
0.0035
3T3 fibroblasts
CTACTAACCC
(
8
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
AGCCGGGCGT (
3
)
9.9
0.0099
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
TGAAAATGTA
(
5
)
22.7
0.0227
P1 cortex
TTTTAACTTT (
3
)
9.1
0.0091
P1 cortex
TTCACCTTTA
(
4
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
AGCCGGAGTA
(
3
)
1.8
0.0018
Hypothalamus
CAAACATAGC
(
3
)
1.8
0.0018
Hypothalamus
TGAATAAAAA (
5
)
1.8
0.0018
Hypothalamus
TTCAAAAGAG
(
4
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
AGCCGGAGTA
(
3
)
3.8
0.0038
E12.5 retina
AGCCGGGCGT (
3
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
AGCCGGAGTA
(
3
)
1.8
0.0018
E14.5 retina
CAAACATAGC
(
3
)
1.8
0.0018
E14.5 retina
TTCAAAAGAG
(
4
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TTCAAAAGAG
(
4
)
5.4
0.0054
E16.5 retina
CAAACATAGC
(
3
)
3.6
0.0036
E16.5 retina
AGACCCTGCC (
5
)
1.8
0.0018
E16.5 retina
TGAATAAAAA (
5
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
CAAACATAGC
(
3
)
3.6
0.0036
E18.5 retina
AGCCGGAGTA
(
3
)
1.8
0.0018
E18.5 retina
TGAATAAAAA (
5
)
1.8
0.0018
E18.5 retina
TGAATAACAA
(
3
)
1.8
0.0018
E18.5 retina
TTCAAAAGAG
(
4
)
1.8
0.0018
E18.5 retina
TTCACCTTTA
(
4
)
1.8
0.0018
E18.5 retina
TTTTAACTTT (
3
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
TTCAAAAGAG
(
4
)
7.9
0.0079
P0.5 retina
CAAACATAGC
(
3
)
3.9
0.0039
P0.5 retina
GAGTCCTGAC (
7
)
3.9
0.0039
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GAGTCCTGAC (
7
)
7
0.007
P2.5 retina
AGACCCTGCC (
5
)
3.5
0.0035
P2.5 retina
AGCCGGGCGT (
3
)
3.5
0.0035
P2.5 retina
CAAACATAGC
(
3
)
3.5
0.0035
P2.5 retina
TGAATAAAAA (
5
)
1.8
0.0018
P2.5 retina
TGAATAACAA
(
3
)
1.8
0.0018
P2.5 retina
TTCAAAAGAG
(
4
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GAGTCCTGAC (
7
)
5.9
0.0059
P4.5 retina
AGACCCTGCC (
5
)
4
0.004
P4.5 retina
CAAACATAGC
(
3
)
2
0.002
P4.5 retina
TGAATAAAAA (
5
)
2
0.002
P4.5 retina
TTCAAAAGAG
(
4
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
CAAACATAGC
(
3
)
8.3
0.0083
P6.5 retina
TTCAAAAGAG
(
4
)
3.3
0.0033
P6.5 retina
AGCCGGAGTA
(
3
)
1.7
0.0017
P6.5 retina
AGCCGGGCGT (
3
)
1.7
0.0017
P6.5 retina
CTACTAACCC
(
8
)
1.7
0.0017
P6.5 retina
TGAATAAAAA (
5
)
1.7
0.0017
P6.5 retina
TTCACCTTTA
(
4
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
AGCCGGAGTA
(
3
)
5.6
0.0056
P10.5 crx- retina
CAAACATAGC
(
3
)
5.6
0.0056
P10.5 crx- retina
AGACCCTGCC (
5
)
3.7
0.0037
P10.5 crx- retina
GAGTCCTGAC (
7
)
3.7
0.0037
P10.5 crx- retina
TTCAAAAGAG
(
4
)
3.7
0.0037
P10.5 crx- retina
AGCCGGGCGT (
3
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
AGACCCTGCC (
5
)
3.8
0.0038
P10.5 crx+ retina
GAGTCCTGAC (
7
)
3.8
0.0038
P10.5 crx+ retina
TTCAAAAGAG
(
4
)
3.8
0.0038
P10.5 crx+ retina
AGCCGGGCGT (
3
)
1.9
0.0019
P10.5 crx+ retina
CAAACATAGC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGAATAAAAA (
5
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
CAAACATAGC
(
3
)
5.6
0.0056
Adult retinal
TTCAAAAGAG
(
4
)
5.6
0.0056
Adult retinal
AGACCCTGCC (
5
)
1.9
0.0019
Adult retinal
AGCCGGAGTA
(
3
)
1.9
0.0019
Adult retinal
AGCCGGGCGT (
3
)
1.9
0.0019
Adult retinal
GAGTCCTGAC (
7
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
AGACCCTGCC (
5
)
1.9
0.0019
ONL
CAAACATAGC
(
3
)
1.9
0.0019
ONL
TGAATAAAAA (
5
)
1.9
0.0019
ONL
TGAATGAGAA
(
5
)
1.9
0.0019
ONL
TTCAAAAGAG
(
4
)
1.9
0.0019
