Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27624	H2afv	H2A histone family, member V	11		77605
Gene Ontology	chromosome | chromosome organization and biogenesis (sensu Eukarya) | DNA binding | nucleosome | nucleosome assembly | nucleus
Human Homolog	H2AFV[H2A histone family, member V]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTTGATTGG 93 0.093 P8 Cb GC CTGCCCATTG (4) 4.9 0.0049 P8 Cb GC GTGTTTGATT (2) 1.6 0.0016 P8 Cb GC TGTTGATTAG (4) 1.6 0.0016 Cb medulloblastoma TGTTGATTGG 16.2 0.0162 Cb medulloblastoma CTGCCCATTG (4) 6.9 0.0069 Cb medulloblastoma ACTGTGACCA (3) 2.3 0.0023 P8 GC+1d culture TGTTGATTGG 87.9 0.0879 P8 GC+1d culture CTGCCCATTG (4) 5.7 0.0057 P8 GC+1d culture ACAAGCACAA (7) 4.6 0.0046 P8 GC+1d culture ACTGTGACCA (3) 1.1 0.0011 P8 GC+1d culture GACGGGTGGG 1.1 0.0011 P8 GC+SHH+1d culture TGTTGATTGG 111.2 0.1112 P8 GC+SHH+1d culture ACAAGCACAA (7) 3.5 0.0035 P8 GC+SHH+1d culture CTGCCCATTG (4) 3.5 0.0035 P8 GC+SHH+1d culture ACTGTGACCA (3) 2.3 0.0023 P8 GC+SHH+1d culture GACGGGTGGG 1.2 0.0012 3T3 fibroblasts CTGCCCATTG (4) 7 0.007 3T3 fibroblasts TGTTGATTAG (4) 7 0.007 E15 cortex TGTTGATTGG 34.6 0.0346 P1 cortex TGTTGATTGG 13.6 0.0136 P1 cortex CTGCCCATTG (4) 4.5 0.0045 Hypothalamus TGTTGATTGG 9.1 0.0091 Hypothalamus ACAAGCACAA (7) 1.8 0.0018 Hypothalamus CTGCCCATTG (4) 1.8 0.0018 E12.5 retina TGTTGATTGG 78.8 0.0788 E12.5 retina GTGTTTGATT (2) 5.6 0.0056 E12.5 retina CTGCCCATTG (4) 3.8 0.0038 E14.5 retina TGTTGATTGG 85.6 0.0856 E14.5 retina ACAAGCACAA (7) 5.5 0.0055 E14.5 retina ACTGTGACCA (3) 5.5 0.0055 E14.5 retina GCTGGAGGCA (6) 3.6 0.0036 E14.5 retina GACGGGTGGG 1.8 0.0018 E16.5 retina TGTTGATTGG 110.5 0.1105 E16.5 retina ACTGTGACCA (3) 5.4 0.0054 E16.5 retina GACGGGTGGG 3.6 0.0036 E16.5 retina GCTGGAGGCA (6) 3.6 0.0036 E16.5 retina ACAAGCACAA (7) 1.8 0.0018 E18.5 retina TGTTGATTGG 140.1 0.1401 E18.5 retina ACTGTGACCA (3) 7.3 0.0073 E18.5 retina GTGTTTGATT (2) 3.6 0.0036 E18.5 retina CTGCCCATTG (4) 1.8 0.0018 P0.5 retina TGTTGATTGG 104 0.104 P0.5 retina CTGCCCATTG (4) 7.9 0.0079 P0.5 retina ACAAGCACAA (7) 2 0.002 P0.5 retina GACGGGTGGG 2 0.002 P0.5 retina GTGTTTGATT (2) 2 0.002 P2.5 retina TGTTGATTGG 188.3 0.1883 P2.5 retina ACAAGCACAA (7) 3.5 0.0035 P2.5 retina CTGCCCATTG (4) 1.8 0.0018 P4.5 retina TGTTGATTGG 122.8 0.1228 P6.5 retina TGTTGATTGG 76.7 0.0767 P6.5 retina GTGTTTGATT (2) 5 0.005 P10.5 crx- retina TGTTGATTGG 33.4 0.0334 P10.5 crx- retina GACGGGTGGG 1.9 0.0019 P10.5 crx+ retina TGTTGATTGG 34.6 0.0346 P10.5 crx+ retina ACTGTGACCA (3) 1.9 0.0019 P10.5 crx+ retina GTGTTTGATT (2) 1.9 0.0019 Adult retinal TGTTGATTGG 27.8 0.0278 Adult retinal ACAAGCACAA (7) 1.9 0.0019 Adult retinal ACTGTGACCA (3) 1.9 0.0019 Adult retinal CTGCCCATTG (4) 1.9 0.0019 ONL TGTTGATTGG 7.7 0.0077 ONL GACGGGTGGG 3.8 0.0038 ONL ACAAGCACAA (7) 1.9 0.0019 ONL GCTGGAGGCA (6) 1.9 0.0019 ONL GTGTTTGATT (2) 1.9 0.0019